RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 C10orf91Q5T1B1 145 aa20.27■□□□□ 0.83
HOXB3-208ENST00000476342 RASL11AQ6T310 242 aa20.27■□□□□ 0.83
HOXB3-208ENST00000476342 DNAJC30Q96LL9 226 aa20.27■□□□□ 0.83
HOXB3-208ENST00000476342 M0R2N4 97 aa20.26■□□□□ 0.83
HOXB3-208ENST00000476342 LELP1Q5T871 98 aa20.26■□□□□ 0.83
HOXB3-208ENST00000476342 CARHSP1Q9Y2V2 147 aaKnown RBP20.26■□□□□ 0.83
HOXB3-208ENST00000476342 TNFRSF18Q9Y5U5 241 aa20.26■□□□□ 0.83
HOXB3-208ENST00000476342 TRAV8-6A0A0B4J262 113 aa20.25■□□□□ 0.83
HOXB3-208ENST00000476342 OR10J3Q5JRS4 329 aa20.25■□□□□ 0.83
HOXB3-208ENST00000476342 A0A087WWC5 75 aa20.24■□□□□ 0.83
HOXB3-208ENST00000476342 NBDYA0A0U1RRE5 68 aa20.24■□□□□ 0.83
HOXB3-208ENST00000476342 TTC32Q5I0X7 151 aa20.23■□□□□ 0.83
HOXB3-208ENST00000476342 FRZBQ92765 325 aa20.23■□□□□ 0.83
HOXB3-208ENST00000476342 S100A8P05109 93 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 Q6ZR54 194 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 WFDC10BQ8IUB3 73 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 GATD1Q8NB37 220 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 CTDSP1Q9GZU7 261 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 NIT2Q9NQR4 276 aa20.22■□□□□ 0.83
HOXB3-208ENST00000476342 TRAV26-2A0A0B4J265 109 aa20.21■□□□□ 0.83
HOXB3-208ENST00000476342 CAMPP49913 170 aa20.21■□□□□ 0.83
HOXB3-208ENST00000476342 HBBP68871 147 aa20.21■□□□□ 0.83
HOXB3-208ENST00000476342 MRPL54Q6P161 138 aaKnown RBP20.21■□□□□ 0.83
HOXB3-208ENST00000476342 DAZ4Q86SG3 579 aaKnown RBP20.21■□□□□ 0.83
HOXB3-208ENST00000476342 DAZ3Q9NR90 486 aaKnown RBP20.21■□□□□ 0.83
HOXB3-208ENST00000476342 ATP5L2Q7Z4Y8 100 aa20.2■□□□□ 0.82
HOXB3-208ENST00000476342 AMN1Q8IY45 258 aa20.19■□□□□ 0.82
HOXB3-208ENST00000476342 IGHV3-38A0A0C4DH36 116 aa20.18■□□□□ 0.82
HOXB3-208ENST00000476342 RAB4AP20338 218 aa20.18■□□□□ 0.82
HOXB3-208ENST00000476342 NDUFA5Q16718 116 aa20.18■□□□□ 0.82
HOXB3-208ENST00000476342 IMMP2LQ96T52 175 aa20.18■□□□□ 0.82
HOXB3-208ENST00000476342 A0A1B0GXF2 115 aa20.17■□□□□ 0.82
HOXB3-208ENST00000476342 TMEM97Q5BJF2 176 aa20.17■□□□□ 0.82
HOXB3-208ENST00000476342 RNF185Q96GF1 192 aa20.17■□□□□ 0.82
HOXB3-208ENST00000476342 DNAH10OSP0CZ25 163 aa20.16■□□□□ 0.82
HOXB3-208ENST00000476342 RHEBQ15382 184 aa20.16■□□□□ 0.82
HOXB3-208ENST00000476342 MRAP2Q96G30 205 aa20.16■□□□□ 0.82
HOXB3-208ENST00000476342 TRAV9-2A0A087WT02 112 aa20.15■□□□□ 0.82
HOXB3-208ENST00000476342 KCNIP4Q6PIL6 250 aa20.15■□□□□ 0.82
HOXB3-208ENST00000476342 CLRN3Q8NCR9 226 aa20.15■□□□□ 0.82
HOXB3-208ENST00000476342 K7EP13 123 aa20.14■□□□□ 0.81
HOXB3-208ENST00000476342 FAM104BQ5XKR9 115 aa20.14■□□□□ 0.81
HOXB3-208ENST00000476342 BTF3L4Q96K17 158 aa20.14■□□□□ 0.81
HOXB3-208ENST00000476342 TMEM242Q9NWH2 141 aa20.14■□□□□ 0.81
HOXB3-208ENST00000476342 C7orf77A4D0Y5 90 aa20.13■□□□□ 0.81
HOXB3-208ENST00000476342 APOC3P02656 99 aa20.13■□□□□ 0.81
HOXB3-208ENST00000476342 RPL39LQ96EH5 51 aaKnown RBP20.13■□□□□ 0.81
HOXB3-208ENST00000476342 TRBV6-8A0A0A6YYG3 113 aa20.12■□□□□ 0.81
HOXB3-208ENST00000476342 LINC01556Q5JQF7 62 aa20.12■□□□□ 0.81
HOXB3-208ENST00000476342 KRTAP1-5Q9BYS1 174 aa20.11■□□□□ 0.81
HOXB3-208ENST00000476342 C1orf134Q5TEV5 83 aa20.1■□□□□ 0.81
HOXB3-208ENST00000476342 SVBPQ8N300 66 aa20.1■□□□□ 0.81
HOXB3-208ENST00000476342 C10orf126Q8N4M7 172 aa20.1■□□□□ 0.81
HOXB3-208ENST00000476342 RPS10P5Q9NQ39 176 aa20.1■□□□□ 0.81
HOXB3-208ENST00000476342 S100PP25815 95 aa20.1■□□□□ 0.81
HOXB3-208ENST00000476342 PPP1R17O96001 155 aa20.09■□□□□ 0.81
HOXB3-208ENST00000476342 TRAV9-1A0A075B6T8 112 aa20.08■□□□□ 0.8
HOXB3-208ENST00000476342 TRBV6-5A0A0K0K1A5 114 aa20.08■□□□□ 0.8
HOXB3-208ENST00000476342 SNAPINO95295 136 aa20.08■□□□□ 0.8
HOXB3-208ENST00000476342 BTF3P20290 206 aaKnown RBP20.08■□□□□ 0.8
HOXB3-208ENST00000476342 MRPL51Q4U2R6 128 aaKnown RBP20.08■□□□□ 0.8
HOXB3-208ENST00000476342 C6orf223Q8N319 242 aa20.08■□□□□ 0.8
HOXB3-208ENST00000476342 TRBV25-1A0A075B6N4 114 aa20.07■□□□□ 0.8
HOXB3-208ENST00000476342 URGCP-MRPS24S4R325 110 aa20.07■□□□□ 0.8
HOXB3-208ENST00000476342 DNAH2Q9P225 4427 aa20.07■□□□□ 0.8
HOXB3-208ENST00000476342 SDHAF1A6NFY7 115 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 GAS8-AS1O95177 125 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 NCR2O95944 276 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 COTL1Q14019 142 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 NTM-AS1Q6ZSK4 140 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 ST20Q9HBF5 79 aa20.06■□□□□ 0.8
HOXB3-208ENST00000476342 IGHV3-30P01768 117 aa20.05■□□□□ 0.8
HOXB3-208ENST00000476342 IGHV3-33P01772 117 aa20.05■□□□□ 0.8
HOXB3-208ENST00000476342 IGHV3-30-3P0DP02 117 aa20.05■□□□□ 0.8
HOXB3-208ENST00000476342 IGHV3-30-5P0DP03 117 aa20.05■□□□□ 0.8
HOXB3-208ENST00000476342 NIT1Q86X76 327 aa20.05■□□□□ 0.8
HOXB3-208ENST00000476342 IGHV1-24A0A0C4DH33 117 aa20.04■□□□□ 0.8
HOXB3-208ENST00000476342 SMKR1H3BMG3 65 aa20.04■□□□□ 0.8
HOXB3-208ENST00000476342 CKS2P33552 79 aa20.04■□□□□ 0.8
HOXB3-208ENST00000476342 RPS10P46783 165 aaKnown RBP20.04■□□□□ 0.8
HOXB3-208ENST00000476342 SLC7A5P1Q8MH63 180 aa20.04■□□□□ 0.8
HOXB3-208ENST00000476342 IQCJQ1A5X6 159 aa20.03■□□□□ 0.8
HOXB3-208ENST00000476342 CHCHD5Q9BSY4 110 aa20.03■□□□□ 0.8
HOXB3-208ENST00000476342 CHCHD7Q9BUK0 85 aa20.03■□□□□ 0.8
HOXB3-208ENST00000476342 PKIAP61925 76 aa20.02■□□□□ 0.8
HOXB3-208ENST00000476342 FRAS1Q86XX4 4008 aa20.02■□□□□ 0.8
HOXB3-208ENST00000476342 DNAH10Q8IVF4 4471 aa20.02■□□□□ 0.79
HOXB3-208ENST00000476342 A0A087WX48 190 aa20.02■□□□□ 0.79
HOXB3-208ENST00000476342 TMEM262E9PQX1 116 aa20.01■□□□□ 0.79
HOXB3-208ENST00000476342 PPBPP02775 128 aa20.01■□□□□ 0.79
HOXB3-208ENST00000476342 LINC00336Q6ZUF6 198 aa20.01■□□□□ 0.79
HOXB3-208ENST00000476342 NRACQ8N912 160 aa20.01■□□□□ 0.79
HOXB3-208ENST00000476342 TMEM70Q9BUB7 260 aa20.01■□□□□ 0.79
HOXB3-208ENST00000476342 D6R8Y8 96 aa20■□□□□ 0.79
HOXB3-208ENST00000476342 I3L3M4 83 aa20■□□□□ 0.79
HOXB3-208ENST00000476342 RTL8CO15255 209 aa20■□□□□ 0.79
HOXB3-208ENST00000476342 PMCHP20382 165 aa20■□□□□ 0.79
HOXB3-208ENST00000476342 AMTP48728 403 aa19.98■□□□□ 0.79
HOXB3-208ENST00000476342 SUMO2P61956 95 aaKnown RBP19.98■□□□□ 0.79
HOXB3-208ENST00000476342 Q8N3U1 123 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms