RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PANO1I0J062 215 aa8.43□□□□□ -1.06
MRPL55-228ENST00000476267 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
MRPL55-228ENST00000476267 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
MRPL55-228ENST00000476267 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
MRPL55-228ENST00000476267 STOML3Q8TAV4 291 aa8.43□□□□□ -1.06
MRPL55-228ENST00000476267 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
MRPL55-228ENST00000476267 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
MRPL55-228ENST00000476267 ARPC5O15511 151 aa8.42□□□□□ -1.06
MRPL55-228ENST00000476267 S100A9P06702 114 aaKnown RBP8.42□□□□□ -1.06
MRPL55-228ENST00000476267 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
MRPL55-228ENST00000476267 PKIAP61925 76 aa8.42□□□□□ -1.06
MRPL55-228ENST00000476267 MBD3L1Q8WWY6 194 aa8.42□□□□□ -1.06
MRPL55-228ENST00000476267 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
MRPL55-228ENST00000476267 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-228ENST00000476267 RBX1P62877 108 aa8.41□□□□□ -1.06
MRPL55-228ENST00000476267 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
MRPL55-228ENST00000476267 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
MRPL55-228ENST00000476267 MUC21A0A0G2JKD1 596 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 MUC21A0A140T8X8 626 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.06
MRPL55-228ENST00000476267 IQCJQ1A5X6 159 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
MRPL55-228ENST00000476267 ZNF345Q14585 488 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 SPANXN1Q5VSR9 72 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 BAGE2Q86Y30 109 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 KCNRGQ8N5I3 272 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 TNXBP22105 4242 aa8.39□□□□□ -1.07
MRPL55-228ENST00000476267 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 M0QY20 66 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 CNBPP62633 177 aaKnown RBP8.38□□□□□ -1.07
MRPL55-228ENST00000476267 GAGE6Q13070 117 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 C20orf203Q8NBC4 194 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 SFT2D1Q8WV19 159 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 AP1S3Q96PC3 154 aa8.38□□□□□ -1.07
MRPL55-228ENST00000476267 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 F5H697 171 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 TMUB2Q71RG4 321 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.37□□□□□ -1.07
MRPL55-228ENST00000476267 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
MRPL55-228ENST00000476267 A0A1B0GV50 99 aa8.36□□□□□ -1.07
MRPL55-228ENST00000476267 PFDN1O60925 122 aa8.36□□□□□ -1.07
MRPL55-228ENST00000476267 SLPIP03973 132 aa8.36□□□□□ -1.07
MRPL55-228ENST00000476267 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
MRPL55-228ENST00000476267 REG3AQ06141 175 aa8.36□□□□□ -1.07
MRPL55-228ENST00000476267 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
MRPL55-228ENST00000476267 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 SMIM17P0DL12 118 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 SSTP61278 116 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
MRPL55-228ENST00000476267 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
MRPL55-228ENST00000476267 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
MRPL55-228ENST00000476267 HMSDA8MTL9 139 aa8.34□□□□□ -1.07
MRPL55-228ENST00000476267 GZMBP10144 247 aa8.34□□□□□ -1.07
MRPL55-228ENST00000476267 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 BCL2L11O43521 198 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 P01737 135 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 CCL20P78556 96 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 Q6ZRU5 148 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 FER1L6-AS1Q8NA97 138 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 PGLYRP4Q96LB8 373 aa8.33□□□□□ -1.08
MRPL55-228ENST00000476267 H7C1H1 209 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 MGPP08493 103 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 NKX2-5P52952 324 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-228ENST00000476267 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 CENPWQ5EE01 88 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 MANBALQ9NQG1 85 aa8.32□□□□□ -1.08
MRPL55-228ENST00000476267 A0A0D9SG52 128 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 CACNG7P62955 275 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 RASL11AQ6T310 242 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 RNF185Q96GF1 192 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
MRPL55-228ENST00000476267 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 A0A087WYN8 130 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 TRAV1-1A0A0B4J248 108 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
MRPL55-228ENST00000476267 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 OR2D3Q8NGH3 330 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 SMIM12Q96EX1 92 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 LRP2P98164 4655 aa8.3□□□□□ -1.08
MRPL55-228ENST00000476267 KANTRA0A1W2PQU2 76 aa8.29□□□□□ -1.08
MRPL55-228ENST00000476267 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
MRPL55-228ENST00000476267 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms