RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	ORM1	P02763	201 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	S100A9	P06702	114 aa	Known RBP	4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	RNASE4	P34096	147 aa	Known RBP	4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	SNRPE	P62304	92 aa	Known RBP	4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	SMUG1	Q53HV7	270 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135		Q6AWC8	147 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	SH2D6	Q7Z4S9	175 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	PRNT	Q86SH4	94 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	EIF4E3	Q8N5X7	224 aa	Known RBP	4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	ZFAND2A	Q8N6M9	145 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	C11orf72	Q8NBR9	251 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	BAALC	Q8WXS3	180 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	TREM1	Q9NP99	234 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	GSN-AS1	Q9NRJ2	163 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	PSG8	Q9UQ74	426 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	IGHV1OR15-1	A0A075B7D0	117 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV8-3	A0A0A6YYJ7	113 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV8-6	A0A0B4J262	113 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRBV6-1	A0A0K0K1D8	114 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	PDE6D	O43924	150 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	BCL2	P10415	239 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	MEF2B	Q02080	365 aa	Predicted RBP	4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	GAGE2B	Q13066	116 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	GAGE2E	Q4V326	116 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	PRR9	Q5T870	116 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	GAGE2A	Q6NT46	116 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	FAM159A	Q6UWV7	190 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	GAGE2D	Q9UEU5	116 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	ZFP30	Q9Y2G7	519 aa		4.59	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRGV4	A0A0C4DH28	118 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	GCG	P01275	180 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	LTA	P01374	205 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	IGHV3-30	P01768	117 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	IGHV3-33	P01772	117 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	PFN1	P07737	140 aa	Known RBP	4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	IGHV3-30-3	P0DP02	117 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	IGHV3-30-5	P0DP03	117 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	TCL1A	P56279	114 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	CCL20	P78556	96 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	TMEM183B	Q1AE95	376 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	IBA57	Q5T440	356 aa	Known RBP	4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	TEX261	Q6UWH6	196 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	ATP6V0E2	Q8NHE4	81 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	C11orf52	Q96A22	123 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	KCNS1	Q96KK3	526 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	SGK494	Q96LW2	274 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	VAX2	Q9UIW0	290 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	NAGK	Q9UJ70	344 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	KLF12	Q9Y4X4	402 aa		4.58	□□□□□ -1.68
HDAC9-223	ENST00000476135	PANO1	I0J062	215 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	SST	P61278	116 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	MUC21	Q5SSG8	566 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	LINC00479	Q96M42	142 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	VCX2	Q9H322	139 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	SDF2L1	Q9HCN8	221 aa		4.57	□□□□□ -1.68
HDAC9-223	ENST00000476135	RPL35	P42766	123 aa	Known RBP	4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	RAB14	P61106	215 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	OR10J3	Q5JRS4	329 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	ZNF506	Q5JVG8	444 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	FAM162B	Q5T6X4	162 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	COX8C	Q7Z4L0	72 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	BAGE2	Q86Y30	109 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	TMEM183A	Q8IXX5	376 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	LYPD6B	Q8NI32	183 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	TVP23C	Q96ET8	276 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	SMIM12	Q96EX1	92 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	EIF5A2	Q9GZV4	153 aa	Known RBP	4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	MED9	Q9NWA0	146 aa		4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	MRPL16	Q9NX20	251 aa	Known RBP	4.56	□□□□□ -1.68
HDAC9-223	ENST00000476135	FABP5P3	A8MUU1	101 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	TMEM250	H0YL14	139 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	ATP6V1G1	O75348	118 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	NDUFS6	O75380	124 aa	Known RBP	4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	S100A4	P26447	101 aa	Known RBP	4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	GNG4	P50150	75 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	ZNF80	P51504	273 aa	Predicted RBP	4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	CENPW	Q5EE01	88 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	CD164L2	Q6UWJ8	174 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	RMI2	Q96E14	147 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	ZC2HC1A	Q96GY0	325 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	FAM210A	Q96ND0	272 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	BIN3	Q9NQY0	253 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135	FSIP2	Q5CZC0	6907 aa		4.55	□□□□□ -1.68
HDAC9-223	ENST00000476135		B4DEV8	164 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	SH2D1A	O60880	128 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	TYMS	P04818	313 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	MGST1	P10620	155 aa	Known RBP	4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	CEBPG	P53567	150 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	UBE2V1	Q13404	147 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	C14orf177	Q52M58	125 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	REG3G	Q6UW15	175 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135		Q6ZQT7	251 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	ZNF479	Q96JC4	524 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	DERL1	Q9BUN8	251 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	TP53TG3	Q9ULZ0	132 aa		4.54	□□□□□ -1.68
HDAC9-223	ENST00000476135	IGHV3-16	A0A0C4DH30	117 aa		4.53	□□□□□ -1.68
HDAC9-223	ENST00000476135	LOC100131303	A0A0U1RQF7	123 aa		4.53	□□□□□ -1.68
HDAC9-223	ENST00000476135		A0A0U1RRA0	63 aa		4.53	□□□□□ -1.68
HDAC9-223	ENST00000476135		M0R036	132 aa		4.53	□□□□□ -1.68
HDAC9-223	ENST00000476135		M0R2P5	195 aa		4.53	□□□□□ -1.68

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