RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
ATG4B-217ENST00000475693 OCIAD2Q56VL3 154 aa13.06□□□□□ -0.32
ATG4B-217ENST00000475693 SPANXN1Q5VSR9 72 aa13.06□□□□□ -0.32
ATG4B-217ENST00000475693 BOD1L2Q8IYS8 172 aa13.06□□□□□ -0.32
ATG4B-217ENST00000475693 PHLDA3Q9Y5J5 127 aa13.06□□□□□ -0.32
ATG4B-217ENST00000475693 D6R8Y8 96 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 H0Y8G0 127 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 SNAI2O43623 268 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 NCR2O95944 276 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 HBDP02042 147 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 TENM3Q9P273 2699 aa13.05□□□□□ -0.32
ATG4B-217ENST00000475693 A6NDN8 102 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 DEFB4AO15263 64 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 EVI2AP22794 236 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 EMP1P54849 157 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 C1QTNF4Q9BXJ3 329 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 RETNQ9HD89 108 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 H3BRM9 83 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 K7EIL1 84 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
ATG4B-217ENST00000475693 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
ATG4B-217ENST00000475693 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
ATG4B-217ENST00000475693 TRAV8-6A0A0B4J262 113 aa13.03□□□□□ -0.32
ATG4B-217ENST00000475693 K7ERU9 68 aa13.03□□□□□ -0.32
ATG4B-217ENST00000475693 HSD52Q0P140 79 aa13.03□□□□□ -0.32
ATG4B-217ENST00000475693 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
ATG4B-217ENST00000475693 TRGV11A0A075B6L2 103 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 APOC4P55056 127 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
ATG4B-217ENST00000475693 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
ATG4B-217ENST00000475693 MRPL16Q9NX20 251 aaKnown RBP13.01□□□□□ -0.33
ATG4B-217ENST00000475693 X6R8D5 127 aa13.01□□□□□ -0.33
ATG4B-217ENST00000475693 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
ATG4B-217ENST00000475693 GTF2H5Q6ZYL4 71 aa13.01□□□□□ -0.33
ATG4B-217ENST00000475693 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-217ENST00000475693 MRAPQ8TCY5 172 aa13.01□□□□□ -0.33
ATG4B-217ENST00000475693 A0A087WWL8 130 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 PLAC8L1A1L4L8 177 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 C9orf118A6NHY6 69 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 KIR2DL5BQ8NHK3 375 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 OR11H2Q8NH07 326 aa13□□□□□ -0.33
ATG4B-217ENST00000475693 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
ATG4B-217ENST00000475693 SMKR1H3BMG3 65 aa12.99□□□□□ -0.33
ATG4B-217ENST00000475693 RRN3P1Q2M238 152 aa12.99□□□□□ -0.33
ATG4B-217ENST00000475693 ERASQ7Z444 233 aa12.99□□□□□ -0.33
ATG4B-217ENST00000475693 LOC389332A0A1B0GUA5 103 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 GAGE10A6NGK3 116 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 CKS2P33552 79 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 CACNG7P62955 275 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 KPRPQ5T749 579 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-217ENST00000475693 LINC00467Q9BRT7 94 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
ATG4B-217ENST00000475693 IGHV4-4A0A075B6R2 117 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 Q6ZTI0 123 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 TMEM263Q8WUH6 116 aaKnown RBP12.97□□□□□ -0.33
ATG4B-217ENST00000475693 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 MED14OSP0DP75 135 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 GATA1P15976 413 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-217ENST00000475693 FAM74A4Q5TZK3 123 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
ATG4B-217ENST00000475693 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
ATG4B-217ENST00000475693 A6NJY4 79 aa12.96□□□□□ -0.33
ATG4B-217ENST00000475693 KRTAP21-3Q3LHN1 58 aa12.96□□□□□ -0.33
ATG4B-217ENST00000475693 VPS25Q9BRG1 176 aa12.96□□□□□ -0.33
ATG4B-217ENST00000475693 HUWE1Q7Z6Z7 4374 aaKnown RBP12.96□□□□□ -0.33
ATG4B-217ENST00000475693 MEGF8Q7Z7M0 2845 aa12.96□□□□□ -0.33
ATG4B-217ENST00000475693 NPYP01303 97 aa12.96□□□□□ -0.34
ATG4B-217ENST00000475693 MAP1LC3AQ9H492 121 aa12.96□□□□□ -0.34
ATG4B-217ENST00000475693 COL7A1Q02388 2944 aa12.95□□□□□ -0.34
ATG4B-217ENST00000475693 A8MZ25 164 aa12.95□□□□□ -0.34
ATG4B-217ENST00000475693 RNF183Q96D59 192 aa12.95□□□□□ -0.34
ATG4B-217ENST00000475693 ZMAT4Q9H898 229 aa12.95□□□□□ -0.34
ATG4B-217ENST00000475693 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
ATG4B-217ENST00000475693 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
ATG4B-217ENST00000475693 K7EP34 96 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 M0R2P5 195 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 NXPH4O95158 308 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 NACAE9PAV3 2078 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 MGPP08493 103 aa12.94□□□□□ -0.34
ATG4B-217ENST00000475693 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 CIDEAO60543 219 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 FCER1GP30273 86 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 GAGE7O76087 117 aa12.93□□□□□ -0.34
ATG4B-217ENST00000475693 GAGE12FP0CL80 117 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms