RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 MYH4Q9Y623 1939 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 RNF17Q9BXT8 1623 aaKnown RBP2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 BIVM-ERCC5R4GMW8 1640 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 ARHGEF12Q9NZN5 1544 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 ICE1Q9Y2F5 2266 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 E9PCH4 1651 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 TFF1P04155 84 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 PKIAP61925 76 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 C6orf52Q5T4I8 152 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 Q8N8P6 123 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 TCHHQ07283 1943 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 USP9XQ93008 2570 aaPredicted RBP2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 NAV2Q8IVL1 2488 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 TARBP1Q13395 1621 aaKnown RBP2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 EFCAB6Q5THR3 1501 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 KDM5DQ9BY66 1539 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 FLNBO75369 2602 aaKnown RBP2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 MCM3APO60318 1980 aa2.16□□□□□ -2.06
SRGAP3-205ENST00000475560 MUC22E2RYF6 1773 aaPredicted RBP2.15□□□□□ -2.06
SRGAP3-205ENST00000475560 ANKRD11Q6UB99 2663 aaPredicted RBP2.15□□□□□ -2.06
SRGAP3-205ENST00000475560 PTPN13Q12923 2485 aa2.15□□□□□ -2.06
SRGAP3-205ENST00000475560 PTPRDP23468 1912 aa2.15□□□□□ -2.06
SRGAP3-205ENST00000475560 NKTRP30414 1462 aaKnown RBP2.15□□□□□ -2.06
SRGAP3-205ENST00000475560 DOCK10Q96BY6 2186 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 FASNP49327 2511 aaKnown RBP2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 TRBV6-7A0A0A0MS04 114 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 S100A7L2Q5SY68 101 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 GDF5OSQ5U4N7 250 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 C10orf105Q8TEF2 133 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 LINC00526Q96FQ7 95 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 MRPL57Q9BQC6 102 aaKnown RBP2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 SCP2D1Q9UJQ7 156 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 ADCY10Q96PN6 1610 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 SYCP2Q9BX26 1530 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 COL4A1P02462 1669 aa2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 KDM5AP29375 1690 aaKnown RBP2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
SRGAP3-205ENST00000475560 DIDO1Q9BTC0 2240 aaKnown RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 PREX2Q70Z35 1606 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCC3O15438 1527 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCC2Q92887 1545 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 TMEM218A2RU14 115 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 OOSP1A8MZH6 123 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 IFNA17P01571 189 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 NPC2P61916 151 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 HSD52Q0P140 79 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 C9orf116Q5BN46 136 aaPredicted RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 RPL7L1Q6DKI1 246 aaKnown RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 NDUFA11Q86Y39 141 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 C8orf59Q8N0T1 100 aaPredicted RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 C9orf62Q8N4C0 152 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 TSKUQ8WUA8 353 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 ZNF142P52746 1687 aaPredicted RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 ZC3H13Q5T200 1668 aaKnown RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 PCDH15Q96QU1 1955 aa2.14□□□□□ -2.07
SRGAP3-205ENST00000475560 MAP3K4Q9Y6R4 1608 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 PHIPQ8WWQ0 1821 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 TRAV30A0A087WSZ9 112 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 TCRBV3S1A0A5B6 114 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 IL9P15248 144 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 UBE2G1P62253 170 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 INSL4Q14641 139 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 SVBPQ8N300 66 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 OBSCN-AS1Q96MR7 158 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 DSCR8Q96T75 97 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 MRPL35Q9NZE8 188 aaKnown RBP2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCA8O94911 1581 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 SUPT6HQ7KZ85 1726 aaKnown RBP2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 KIAA1551Q9HCM1 1747 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 ERVK-7P63135 1459 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 MROH1Q8NDA8 1641 aa2.13□□□□□ -2.07
SRGAP3-205ENST00000475560 HEATR1Q9H583 2144 aaKnown RBP2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 MAGI3Q5TCQ9 1506 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 CEP170BQ9Y4F5 1589 aaPredicted RBP2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCC5O15440 1437 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 TROQ12816 1431 aaPredicted RBP2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 RTTNQ86VV8 2226 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 A0A087WXM4 84 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 M0R143 59 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 CBLN1P23435 193 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 SPATA45Q537H7 98 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 IFI27L1Q96BM0 104 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 ATP10BO94823 1461 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 RALGAPBQ86X10 1494 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 PRXQ9BXM0 1461 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 NOTCH2Q04721 2471 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 MAP2P11137 1827 aaKnown RBP2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 ROBO1Q9Y6N7 1651 aa2.12□□□□□ -2.07
SRGAP3-205ENST00000475560 EPG5Q9HCE0 2579 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 ITSN1Q15811 1721 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 RBBP6Q7Z6E9 1792 aaKnown RBP2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 CICQ96RK0 1608 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms