RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
VPS36-203ENST00000475375 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
VPS36-203ENST00000475375 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
VPS36-203ENST00000475375 AQP10Q96PS8 301 aa13.01□□□□□ -0.33
VPS36-203ENST00000475375 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
VPS36-203ENST00000475375 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
VPS36-203ENST00000475375 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
VPS36-203ENST00000475375 ZNF471Q9BX82 626 aaPredicted RBP13□□□□□ -0.33
VPS36-203ENST00000475375 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
VPS36-203ENST00000475375 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
VPS36-203ENST00000475375 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 LTAP01374 205 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 DEFA1P59665 94 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 DEFA3P59666 94 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 SSTP61278 116 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 REG3AQ06141 175 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 C7orf33Q8WU49 177 aa12.98□□□□□ -0.33
VPS36-203ENST00000475375 PHOX2AO14813 284 aa12.97□□□□□ -0.33
VPS36-203ENST00000475375 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
VPS36-203ENST00000475375 SPACA4Q8TDM5 124 aa12.97□□□□□ -0.33
VPS36-203ENST00000475375 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.33
VPS36-203ENST00000475375 AKR1C3P42330 323 aa12.96□□□□□ -0.33
VPS36-203ENST00000475375 RAB5CP51148 216 aa12.96□□□□□ -0.33
VPS36-203ENST00000475375 CST9LP1Q5W188 147 aa12.96□□□□□ -0.33
VPS36-203ENST00000475375 RPL7L1Q6DKI1 246 aaKnown RBP12.96□□□□□ -0.33
VPS36-203ENST00000475375 VAX2Q9UIW0 290 aa12.96□□□□□ -0.33
VPS36-203ENST00000475375 IGHV1-24A0A0C4DH33 117 aa12.95□□□□□ -0.34
VPS36-203ENST00000475375 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
VPS36-203ENST00000475375 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
VPS36-203ENST00000475375 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
VPS36-203ENST00000475375 ODF1Q14990 250 aa12.94□□□□□ -0.34
VPS36-203ENST00000475375 TRAV8-4A0A0B4J246 113 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 P01737 135 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 IQCJQ1A5X6 159 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 INO80EQ8NBZ0 244 aaPredicted RBP12.93□□□□□ -0.34
VPS36-203ENST00000475375 GTSF1Q8WW33 167 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 PLAC8Q9NZF1 115 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 ALG5Q9Y673 324 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 KIF25-AS1Q9Y6Z4 181 aa12.93□□□□□ -0.34
VPS36-203ENST00000475375 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
VPS36-203ENST00000475375 SLPIP03973 132 aa12.92□□□□□ -0.34
VPS36-203ENST00000475375 LINC01600Q96MT4 127 aa12.92□□□□□ -0.34
VPS36-203ENST00000475375 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
VPS36-203ENST00000475375 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
VPS36-203ENST00000475375 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
VPS36-203ENST00000475375 SNAI2O43623 268 aa12.9□□□□□ -0.34
VPS36-203ENST00000475375 MGPP08493 103 aa12.9□□□□□ -0.34
VPS36-203ENST00000475375 CXCL1P09341 107 aa12.9□□□□□ -0.34
VPS36-203ENST00000475375 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
VPS36-203ENST00000475375 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
VPS36-203ENST00000475375 FHITP49789 147 aa12.89□□□□□ -0.35
VPS36-203ENST00000475375 MAJINQ3KP22 176 aa12.89□□□□□ -0.35
VPS36-203ENST00000475375 Q5BKY6 102 aa12.89□□□□□ -0.35
VPS36-203ENST00000475375 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
VPS36-203ENST00000475375 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 GZMBP10144 247 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
VPS36-203ENST00000475375 COX6A2Q02221 97 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 TMEM243Q9BU79 118 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
VPS36-203ENST00000475375 GFRA4Q9GZZ7 299 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 MED28Q9H204 178 aa12.88□□□□□ -0.35
VPS36-203ENST00000475375 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
VPS36-203ENST00000475375 SULT1A2P50226 295 aa12.87□□□□□ -0.35
VPS36-203ENST00000475375 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
VPS36-203ENST00000475375 H7C1H1 209 aa12.86□□□□□ -0.35
VPS36-203ENST00000475375 PAGE4O60829 102 aa12.86□□□□□ -0.35
VPS36-203ENST00000475375 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
VPS36-203ENST00000475375 A0A1B0GUV1 79 aa12.85□□□□□ -0.35
VPS36-203ENST00000475375 UBE2L6O14933 153 aa12.85□□□□□ -0.35
VPS36-203ENST00000475375 S100A9P06702 114 aaKnown RBP12.85□□□□□ -0.35
VPS36-203ENST00000475375 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
VPS36-203ENST00000475375 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
VPS36-203ENST00000475375 CFAP161Q6P656 301 aa12.85□□□□□ -0.35
VPS36-203ENST00000475375 A0A0J9YXV3 536 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 M0QY20 66 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
VPS36-203ENST00000475375 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 STPG4Q8N801 248 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 TPPP3Q9BW30 176 aa12.84□□□□□ -0.35
VPS36-203ENST00000475375 IGKV3OR2-268A0A0C4DH90 116 aa12.83□□□□□ -0.36
VPS36-203ENST00000475375 SCO2A0A1W2PP80 73 aa12.83□□□□□ -0.36
VPS36-203ENST00000475375 GAGE12HA6NDE8 117 aa12.83□□□□□ -0.36
VPS36-203ENST00000475375 SUMO4Q6EEV6 95 aa12.83□□□□□ -0.36
VPS36-203ENST00000475375 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
VPS36-203ENST00000475375 REG3GQ6UW15 175 aa12.82□□□□□ -0.36
VPS36-203ENST00000475375 MLST8Q9BVC4 326 aa12.82□□□□□ -0.36
VPS36-203ENST00000475375 A0A1B0GV50 99 aa12.81□□□□□ -0.36
VPS36-203ENST00000475375 PFDN1O60925 122 aa12.81□□□□□ -0.36
VPS36-203ENST00000475375 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
VPS36-203ENST00000475375 AMTP48728 403 aa12.79□□□□□ -0.36
VPS36-203ENST00000475375 RASL11AQ6T310 242 aa12.79□□□□□ -0.36
VPS36-203ENST00000475375 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
VPS36-203ENST00000475375 KRTAP10-8P60410 259 aa12.78□□□□□ -0.36
VPS36-203ENST00000475375 COTL1Q14019 142 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms