RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ALPK2Q86TB3 2170 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 MUC4Q99102 2169 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 LCTP09848 1927 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 MYH8P13535 1937 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 PTPRSQ13332 1948 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 CUL7Q14999 1698 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 CCDC88CQ9P219 2028 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 TROQ12816 1431 aaPredicted RBP0.4□□□□□ -2.34
HDAC9-222ENST00000474742 C10orf71Q711Q0 1435 aa0.4□□□□□ -2.34
HDAC9-222ENST00000474742 RBBP6Q7Z6E9 1792 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SNRNP200O75643 2136 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SPTBP11277 2137 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NUMA1Q14980 2115 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ABCC3O15438 1527 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ERICH3Q5RHP9 1530 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ARHGEF12Q9NZN5 1544 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 PLXNA2O75051 1894 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SBF1O95248 1867 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 DOCK1Q14185 1865 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 TRBV7-3A0A075B6L6 115 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 A0A087WSZ3 146 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 A0A0G2JND7 137 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 A0A0G2JQZ4 141 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 LOC100130705A0A1B0GUX0 176 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SPAARA0A1B0GVQ0 90 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 A0A1W2PNM2 257 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 A0A1W2PPM0 123 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 hADV29S1A0JD25 119 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NUPR2A6NF83 97 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SDHAF1A6NFY7 115 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 D6R8Y8 96 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 HCG22E2RYF7 251 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 K7EP34 96 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 UQCR11O14957 56 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NUPR1O60356 82 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 BCE1O60756 84 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 IGLV3-1P01715 115 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 IGLC1P0CG04 106 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SMIM13P0DJ93 91 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SAA2P0DJI9 122 aaPredicted RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ACYP2P14621 99 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 GCHFRP30047 84 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 CAV3P56539 151 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ROMO1P60602 79 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 RPL37AP61513 92 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q0VG73 95 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 PDE6HQ13956 83 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 PLGLAQ15195 96 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ZNF56Q15929 161 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q1T7F1 81 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SPINK13Q1W4C9 94 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q5XG85 94 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 XAF1Q6GPH4 301 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SFTA2Q6UW10 78 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ZCCHC23Q6ZST2 131 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 MUSTN1Q8IVN3 82 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SBSPONQ8IVN8 264 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 C20orf197Q8N268 126 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q8N6K4 173 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q8N8P6 123 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q8NDZ9 215 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 Q8TAT8 98 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 COX7B2Q8TF08 81 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ZCCHC13Q8WW36 166 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 IFI27L1Q96BM0 104 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 AMELXQ99217 191 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 DPH3P1Q9H4G8 78 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 C16orf95Q9H693 158 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 TMEM14BQ9NUH8 114 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 CACFD1Q9UGQ2 172 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 CCL26Q9Y258 94 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 C22orf24Q9Y442 160 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 LENEPQ9Y5L5 61 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ARHGEF28Q8N1W1 1705 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 TRPM3Q9HCF6 1732 aaPredicted RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NWD2Q9ULI1 1742 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 FREM1Q5H8C1 2179 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 INTS1Q8N201 2190 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 MED12Q93074 2177 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 DOCK10Q96BY6 2186 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 SLX4Q8IY92 1834 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 KIF13AQ9H1H9 1805 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 CCDC88BA6NC98 1476 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 CCDC141Q6ZP82 1450 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 MAGI1Q96QZ7 1491 aaPredicted RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NLRP1Q9C000 1473 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 MBD5Q9P267 1494 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ALPK3Q96L96 1907 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 PLXNB3Q9ULL4 1909 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 ASCC3Q8N3C0 2202 aaKnown RBP0.4□□□□□ -2.35
HDAC9-222ENST00000474742 UNC13CQ8NB66 2214 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 COL18A1P39060 1754 aa0.4□□□□□ -2.35
HDAC9-222ENST00000474742 NYNRINQ9P2P1 1898 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 EDC4Q6P2E9 1401 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ANKARQ7Z5J8 1434 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ZFYVE16Q7Z3T8 1539 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MALRD1Q5VYJ5 2156 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 TRPM1Q7Z4N2 1603 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 PHLPP1O60346 1717 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms