RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 PET117Q6UWS5 81 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 NEGR1Q7Z3B1 354 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 TRAV4A0A0B4J268 109 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 IFI27L1Q96BM0 104 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 OVOL2Q9BRP0 275 aa14.22□□□□□ -0.13
SSR1-204ENST00000474597 TRRAPQ9Y4A5 3859 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 EMP1P54849 157 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 DEFB135Q30KP9 77 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 TEX43Q6ZNM6 134 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 C18orf15Q96N68 181 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 TNFRSF18Q9Y5U5 241 aa14.21□□□□□ -0.13
SSR1-204ENST00000474597 TRGV2A0A075B6R0 118 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 TRBV27A0A0K0K1C4 114 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 GAGE12BA1L429 117 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 GAGE7O76087 117 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 IGHV3-53P01767 116 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 GAGE12FP0CL80 117 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 GAGE12GP0CL81 117 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 GAGE12IP0CL82 117 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 KRTAP10-11P60412 298 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 EGFEM1PQ0D2K5 195 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 G0S2P27469 103 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 VAMP8Q9BV40 100 aa14.2□□□□□ -0.14
SSR1-204ENST00000474597 MAST4O15021 2626 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 P0DMU3 169 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 FAM231AP0DMU4 169 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 FAM231CP0DMU5 169 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 ZNF479Q96JC4 524 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 X6R8D5 127 aa14.19□□□□□ -0.14
SSR1-204ENST00000474597 ATP5LO75964 103 aa14.18□□□□□ -0.14
SSR1-204ENST00000474597 Q6ZSN1 163 aa14.18□□□□□ -0.14
SSR1-204ENST00000474597 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
SSR1-204ENST00000474597 TSTD3H0UI37 97 aa14.17□□□□□ -0.14
SSR1-204ENST00000474597 I3L3M4 83 aa14.17□□□□□ -0.14
SSR1-204ENST00000474597 ATOH7Q8N100 152 aa14.17□□□□□ -0.14
SSR1-204ENST00000474597 ZNF664Q8N3J9 261 aa14.17□□□□□ -0.14
SSR1-204ENST00000474597 DNAJC30Q96LL9 226 aa14.17□□□□□ -0.14
SSR1-204ENST00000474597 CIDEAO60543 219 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 PKIAP61925 76 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 C2orf66Q6UXQ4 117 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 OR11H2Q8NH07 326 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 DEFB104AQ8WTQ1 72 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 TOMM6Q96B49 74 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 STAB1Q9NY15 2570 aa14.16□□□□□ -0.14
SSR1-204ENST00000474597 NEXN-AS1Q8NBZ9 246 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 PRO1933Q9H354 126 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 PAM16Q9Y3D7 125 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 G3V4G9 280 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 PRSS1P07477 247 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 LINC01545Q5VT33 79 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 SCGB3A1Q96QR1 104 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 CYSLTR1Q9Y271 337 aa14.15□□□□□ -0.14
SSR1-204ENST00000474597 LINC01549A6NIU2 74 aa14.14□□□□□ -0.15
SSR1-204ENST00000474597 RHOHQ15669 191 aa14.14□□□□□ -0.15
SSR1-204ENST00000474597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.13□□□□□ -0.15
SSR1-204ENST00000474597 K7EQD1 137 aa14.13□□□□□ -0.15
SSR1-204ENST00000474597 LGALS9CQ6DKI2 356 aa14.13□□□□□ -0.15
SSR1-204ENST00000474597 Q6ZN92 141 aa14.13□□□□□ -0.15
SSR1-204ENST00000474597 PMCHL2Q9BQD1 86 aa14.13□□□□□ -0.15
SSR1-204ENST00000474597 TRGV4A0A0C4DH28 118 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 TSHBP01222 138 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 DEFB130BP0DP73 79 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 DEFB130AP0DP74 79 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 RNF183Q96D59 192 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 TP53TG1Q9Y2A0 90 aa14.12□□□□□ -0.15
SSR1-204ENST00000474597 TRBV10-1A0A0K0K1A3 114 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 TRAV9-2A0A087WT02 112 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 A8MZ25 164 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 MIFP14174 115 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 RIPPLY3P57055 190 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 RPL36AP83881 106 aaKnown RBP14.11□□□□□ -0.15
SSR1-204ENST00000474597 SPATA45Q537H7 98 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 RPL36ALQ969Q0 106 aaKnown RBP14.11□□□□□ -0.15
SSR1-204ENST00000474597 Q9UF83 564 aa14.11□□□□□ -0.15
SSR1-204ENST00000474597 LYRM9A8MSI8 78 aa14.1□□□□□ -0.15
SSR1-204ENST00000474597 ZNRF2Q8NHG8 242 aa14.1□□□□□ -0.15
SSR1-204ENST00000474597 TRBV7-3A0A075B6L6 115 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 IGHV4-28A0A0C4DH34 117 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 HSBP1L1C9JCN9 74 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 SAMD5Q5TGI4 173 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 ERASQ7Z444 233 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 SLC25A29Q8N8R3 303 aa14.09□□□□□ -0.15
SSR1-204ENST00000474597 FAM222AQ5U5X8 452 aa14.08□□□□□ -0.16
SSR1-204ENST00000474597 LINC00612Q8N6U2 182 aa14.08□□□□□ -0.16
SSR1-204ENST00000474597 PHLDA1Q8WV24 401 aaPredicted RBP14.08□□□□□ -0.16
SSR1-204ENST00000474597 COL6A5A8TX70 2615 aa14.08□□□□□ -0.16
SSR1-204ENST00000474597 TRBV6-4A0A1B0GX49 114 aa14.07□□□□□ -0.16
SSR1-204ENST00000474597 DEFB4AO15263 64 aa14.07□□□□□ -0.16
SSR1-204ENST00000474597 RPL39P62891 51 aaKnown RBP14.07□□□□□ -0.16
SSR1-204ENST00000474597 COTL1Q14019 142 aa14.07□□□□□ -0.16
SSR1-204ENST00000474597 MAJINQ3KP22 176 aa14.07□□□□□ -0.16
SSR1-204ENST00000474597 IGHV3-38A0A0C4DH36 116 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 ODF1Q14990 250 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 Q8NAQ8 132 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 C20orf203Q8NBC4 194 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 MDFIQ99750 246 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 PRADC1Q9BSG0 188 aa14.06□□□□□ -0.16
SSR1-204ENST00000474597 GAGE12JA6NER3 117 aa14.05□□□□□ -0.16
SSR1-204ENST00000474597 GAGE1Q13065 139 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms