RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 RAB4AP20338 218 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 DAZ2Q13117 558 aaKnown RBP5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 LGALS9BQ3B8N2 356 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 FAM222AQ5U5X8 452 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 ORMDL3Q8N138 153 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 Q8NAQ8 132 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 PRELID3AQ96N28 172 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 TP53TG1Q9Y2A0 90 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
PKNOX1-205ENST00000474336 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 TRAV4A0A0B4J268 109 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 B5MCH6 92 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BKO60814 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BJP06899 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BOP23527 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BBP33778 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 NDUFA6P56556 154 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BDP58876 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 DAD1P61803 113 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BCP62807 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST2H2BEQ16778 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 IQCJQ1A5X6 159 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 CFAP126Q5VTH2 177 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 BAGE3Q86Y29 109 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 RASL10AQ92737 203 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BHQ93079 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 MRAP2Q96G30 205 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 RNF185Q96GF1 192 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BNQ99877 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 HIST1H2BMQ99879 126 aa5.4□□□□□ -1.54
PKNOX1-205ENST00000474336 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 LYRM9A8MSI8 78 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 H7C1H1 209 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 RS1O15537 224 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 NPYP01303 97 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 PPBPP02775 128 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 CRYGDP07320 174 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 HTN3P15516 51 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 DEFA6Q01524 100 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 OR10J3Q5JRS4 329 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 PIK3CD-AS1Q5SR53 167 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 RNASEKQ6P5S7 137 aaKnown RBP5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 PTH2Q96A98 100 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 RPL39LQ96EH5 51 aaKnown RBP5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 ZNF479Q96JC4 524 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 ALKBH7Q9BT30 221 aaPredicted RBP5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 NDUFAF3Q9BU61 184 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 MAP1LC3AQ9H492 121 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 CELA1Q9UNI1 258 aa5.39□□□□□ -1.55
PKNOX1-205ENST00000474336 MGAM2Q2M2H8 2515 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 DNHD1Q96M86 4753 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 A0A0J9YWU9 116 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 TEX48A0A1B0GUV7 120 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 PHOX2AO14813 284 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 GAS8-AS1O95177 125 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 TM2D3Q9BRN9 247 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
PKNOX1-205ENST00000474336 PDZD11Q5EBL8 140 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 ZFP2Q6ZN57 461 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 FA2HQ7L5A8 372 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 POM121L12Q8N7R1 296 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 C11orf68Q9H3H3 251 aaKnown RBP5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 ST20Q9HBF5 79 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 LAMTOR2Q9Y2Q5 125 aa5.37□□□□□ -1.55
PKNOX1-205ENST00000474336 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 NBEAL2Q6ZNJ1 2754 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 K7EQD1 137 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 HSBP1O75506 76 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 SERF1AO75920 110 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 PPP1R17O96001 155 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 ATP5G1P05496 136 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 P0DMU3 169 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 FAM231AP0DMU4 169 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 FAM231CP0DMU5 169 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 PMCHP20382 165 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 LINC00315P59091 139 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 NRACQ8N912 160 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 U3KQK5 164 aa5.36□□□□□ -1.55
PKNOX1-205ENST00000474336 F5H768 121 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 M0QY20 66 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 CIDEAO60543 219 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 S100A2P29034 98 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 IFI27P40305 119 aaPredicted RBP5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 SNRPEP62304 92 aaKnown RBP5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 Q0VG73 95 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 RHOHQ15669 191 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 UFSP1Q6NVU6 142 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 NEGR1Q7Z3B1 354 aa5.35□□□□□ -1.55
PKNOX1-205ENST00000474336 LINC00612Q8N6U2 182 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms