RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 BAGE3Q86Y29 109 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 NPVFQ9HCQ7 196 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 MRPL40Q9NQ50 206 aaKnown RBP-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 SPCS1Q9Y6A9 102 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 LRRC37A3O60309 1634 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 GOLGA3Q08378 1498 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 IBTKQ9P2D0 1353 aaPredicted RBP-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 ANK2Q01484 3957 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 PIGBOS1A0A0B4J2F0 54 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 HIST1H1AQ02539 215 aaPredicted RBP-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 C9orf116Q5BN46 136 aaPredicted RBP-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 TAC4Q86UU9 113 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 MUC2Q02817 5179 aa-0.27□□□□□ -2.45
ECHDC1-213ENST00000474240 AKAP11Q9UKA4 1901 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 SNCGO76070 127 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 NCR2O95944 276 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 IL5P05113 134 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 RRAS2P62070 204 aaPredicted RBP-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 KRTAP6-1Q3LI64 71 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 PYDC1Q8WXC3 89 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 SPTSSAQ969W0 71 aa-0.28□□□□□ -2.45
ECHDC1-213ENST00000474240 SIPA1L3O60292 1781 aaPredicted RBP-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 TMEM2Q9UHN6 1383 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 PTPN13Q12923 2485 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 DOCK11Q5JSL3 2073 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 M0R2Z0 102 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 Q5VV11 94 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 MIC13Q5XKP0 118 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 SCIMPQ6UWF3 145 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 ZNF818PQ6ZRF7 136 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 WFDC6Q9BQY6 131 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 LAMB1P07942 1786 aa-0.29□□□□□ -2.46
ECHDC1-213ENST00000474240 CELSR1Q9NYQ6 3014 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 KMT2CQ8NEZ4 4911 aaKnown RBP-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 DOPEY2Q9Y3R5 2298 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 SYNJ1O43426 1573 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 CBLN1P23435 193 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 UBE2D1P51668 147 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 CFAP126Q5VTH2 177 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 C10orf82Q8WW14 230 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 SMIM3Q9BZL3 60 aa-0.3□□□□□ -2.46
ECHDC1-213ENST00000474240 K7ERU9 68 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 UBE2G1P62253 170 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 Q5VSD8 79 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 Q6ZUT4 128 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 Q8IZM0 81 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 SPTSSBQ8NFR3 76 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 SCN3BQ9NY72 215 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 ARFGEF1Q9Y6D6 1849 aa-0.31□□□□□ -2.46
ECHDC1-213ENST00000474240 NCOR1O75376 2440 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 NSD1Q96L73 2696 aaPredicted RBP-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 IGLC6P0CF74 106 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 DCDP81605 110 aaKnown RBP-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 SMIM4Q8WVI0 70 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 KIAA0100Q14667 2235 aaKnown RBP-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 ARHGEF10O15013 1369 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 MYH13Q9UKX3 1938 aa-0.32□□□□□ -2.46
ECHDC1-213ENST00000474240 IFT172Q9UG01 1749 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 CACNA1AO00555 2505 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 FAM236AA0A1B0GUQ0 79 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 FAM236BA0A1B0GV22 79 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 G3V318 75 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 M0R129 80 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 NDUFB6O95139 128 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 GUCA1AP43080 201 aaPredicted RBP-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 TCEAL4Q96EI5 215 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 R4GMQ9 66 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 CHD9Q3L8U1 2897 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 NWD2Q9ULI1 1742 aa-0.33□□□□□ -2.46
ECHDC1-213ENST00000474240 CKS1BP61024 79 aa-0.34□□□□□ -2.46
ECHDC1-213ENST00000474240 KCNRGQ8N5I3 272 aa-0.34□□□□□ -2.46
ECHDC1-213ENST00000474240 AQP10Q96PS8 301 aa-0.34□□□□□ -2.46
ECHDC1-213ENST00000474240 SEC11CQ9BY50 192 aa-0.34□□□□□ -2.46
ECHDC1-213ENST00000474240 MUC22E2RYF6 1773 aaPredicted RBP-0.34□□□□□ -2.46
ECHDC1-213ENST00000474240 CDK5RAP2Q96SN8 1893 aa-0.35□□□□□ -2.46
ECHDC1-213ENST00000474240 TSPAN19P0C672 248 aa-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 DR1Q01658 176 aa-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 SPAG11BQ08648 103 aa-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 PPRC1Q5VV67 1664 aaKnown RBP-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 ANKRD30AQ9BXX3 1397 aa-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 SPTBN2O15020 2390 aa-0.35□□□□□ -2.47
ECHDC1-213ENST00000474240 FXYD6-FXYD2A0A087WZ82 144 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 CCL8P80075 99 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 HAMPP81172 84 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 S100A7L2Q5SY68 101 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 AKAP14Q86UN6 197 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 COPS9Q8WXC6 57 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 COPZ2Q9P299 210 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 LINC00312Q9Y6C7 94 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 PXDNQ92626 1479 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 ERCC6L2Q5T890 1561 aa-0.36□□□□□ -2.47
ECHDC1-213ENST00000474240 FHAD1B1AJZ9 1412 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 PRG4Q92954 1404 aaPredicted RBP-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 ZMYM4Q5VZL5 1548 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 PKDREJQ9NTG1 2253 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 CTXND1A0A1B0GTU2 59 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 PPP1R17O96001 155 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 B2MP61769 119 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 TSTD1Q8NFU3 115 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms