RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 LRCOL1A6NCL2 159 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 TMEM262E9PQX1 116 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
SNX13-206ENST00000474067 CRPP02741 224 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 Q9UF83 564 aa13.69□□□□□ -0.22
SNX13-206ENST00000474067 DYNC1H1Q14204 4646 aaKnown RBP13.69□□□□□ -0.22
SNX13-206ENST00000474067 MGPP08493 103 aa13.68□□□□□ -0.22
SNX13-206ENST00000474067 SMIM15Q7Z3B0 74 aa13.68□□□□□ -0.22
SNX13-206ENST00000474067 DPH3P1Q9H4G8 78 aa13.68□□□□□ -0.22
SNX13-206ENST00000474067 TRBV20OR9-2A0A075B6H5 130 aa13.67□□□□□ -0.22
SNX13-206ENST00000474067 TRBV25-1A0A075B6N4 114 aa13.67□□□□□ -0.22
SNX13-206ENST00000474067 RPP21Q9H633 154 aaKnown RBP13.67□□□□□ -0.22
SNX13-206ENST00000474067 KLK12Q9UKR0 248 aa13.67□□□□□ -0.22
SNX13-206ENST00000474067 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
SNX13-206ENST00000474067 GZMBP10144 247 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 NUDT10Q8NFP7 164 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 LYPD6BQ8NI32 183 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 FRZBQ92765 325 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 NUDT11Q96G61 164 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 CHCHD5Q9BSY4 110 aa13.66□□□□□ -0.22
SNX13-206ENST00000474067 IGKV2D-24A0A075B6R9 120 aa13.65□□□□□ -0.22
SNX13-206ENST00000474067 LYZL1Q6UWQ5 148 aa13.65□□□□□ -0.22
SNX13-206ENST00000474067 UBE2WQ96B02 151 aa13.65□□□□□ -0.22
SNX13-206ENST00000474067 EIF5A2Q9GZV4 153 aaKnown RBP13.65□□□□□ -0.22
SNX13-206ENST00000474067 NTF3P20783 257 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 CTRLP40313 264 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 C14orf177Q52M58 125 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 RASL11AQ6T310 242 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 Q8N976 141 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 C1orf43Q9BWL3 253 aa13.64□□□□□ -0.23
SNX13-206ENST00000474067 TWIST1Q15672 202 aa13.63□□□□□ -0.23
SNX13-206ENST00000474067 BORCS7Q96B45 105 aa13.63□□□□□ -0.23
SNX13-206ENST00000474067 CNFNQ9BYD5 112 aa13.63□□□□□ -0.23
SNX13-206ENST00000474067 IGHV1-24A0A0C4DH33 117 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 A8MWL6 223 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 M0QY20 66 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 ANGP03950 147 aaKnown RBP13.62□□□□□ -0.23
SNX13-206ENST00000474067 FAM231DQ6ZW35 169 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 Q8N3U1 123 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 OCC1Q8TAD7 63 aa13.62□□□□□ -0.23
SNX13-206ENST00000474067 GATCO43716 136 aaKnown RBP13.61□□□□□ -0.23
SNX13-206ENST00000474067 SUMO4Q6EEV6 95 aa13.61□□□□□ -0.23
SNX13-206ENST00000474067 ATRAIDQ6UW56 229 aa13.61□□□□□ -0.23
SNX13-206ENST00000474067 TEX261Q6UWH6 196 aa13.61□□□□□ -0.23
SNX13-206ENST00000474067 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
SNX13-206ENST00000474067 EPM2AB3EWF7 344 aa13.6□□□□□ -0.23
SNX13-206ENST00000474067 CEBPGP53567 150 aa13.6□□□□□ -0.23
SNX13-206ENST00000474067 MIAQ16674 131 aa13.6□□□□□ -0.23
SNX13-206ENST00000474067 IQCJQ1A5X6 159 aa13.6□□□□□ -0.23
SNX13-206ENST00000474067 CT83Q5H943 113 aa13.6□□□□□ -0.23
SNX13-206ENST00000474067 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
SNX13-206ENST00000474067 KRTAP10-1P60331 282 aa13.59□□□□□ -0.23
SNX13-206ENST00000474067 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
SNX13-206ENST00000474067 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
SNX13-206ENST00000474067 RYR1P21817 5038 aa13.59□□□□□ -0.23
SNX13-206ENST00000474067 K7EN84 100 aa13.58□□□□□ -0.24
SNX13-206ENST00000474067 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
SNX13-206ENST00000474067 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
SNX13-206ENST00000474067 SMIM7Q9BQ49 75 aa13.58□□□□□ -0.24
SNX13-206ENST00000474067 KRTAP17-1Q9BYP8 105 aa13.58□□□□□ -0.24
SNX13-206ENST00000474067 FUSP35637 526 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX13-206ENST00000474067 UBE2L6O14933 153 aa13.56□□□□□ -0.24
SNX13-206ENST00000474067 NKX2-5P52952 324 aaPredicted RBP13.56□□□□□ -0.24
SNX13-206ENST00000474067 COTL1Q14019 142 aa13.56□□□□□ -0.24
SNX13-206ENST00000474067 BAALCQ8WXS3 180 aa13.56□□□□□ -0.24
SNX13-206ENST00000474067 TMEM243Q9BU79 118 aa13.56□□□□□ -0.24
SNX13-206ENST00000474067 ZNF727A8MUV8 499 aa13.55□□□□□ -0.24
SNX13-206ENST00000474067 FAM74A3Q4VXF1 159 aa13.55□□□□□ -0.24
SNX13-206ENST00000474067 GFRA4Q9GZZ7 299 aa13.55□□□□□ -0.24
SNX13-206ENST00000474067 LRP1BQ9NZR2 4599 aa13.55□□□□□ -0.24
SNX13-206ENST00000474067 FAM231BA6NCW3 169 aa13.54□□□□□ -0.24
SNX13-206ENST00000474067 XGP55808 180 aa13.54□□□□□ -0.24
SNX13-206ENST00000474067 NTM-AS1Q6ZSK4 140 aa13.54□□□□□ -0.24
SNX13-206ENST00000474067 FAM229AH3BQW9 127 aa13.53□□□□□ -0.24
SNX13-206ENST00000474067 LECT2O14960 151 aa13.53□□□□□ -0.24
SNX13-206ENST00000474067 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
SNX13-206ENST00000474067 RBX1P62877 108 aa13.53□□□□□ -0.24
SNX13-206ENST00000474067 GAGE6Q13070 117 aa13.53□□□□□ -0.24
SNX13-206ENST00000474067 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.52□□□□□ -0.25
SNX13-206ENST00000474067 TRAV8-4A0A0B4J246 113 aa13.52□□□□□ -0.25
SNX13-206ENST00000474067 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
SNX13-206ENST00000474067 ENHOQ6UWT2 76 aa13.52□□□□□ -0.25
SNX13-206ENST00000474067 PRR34Q9NV39 138 aa13.52□□□□□ -0.25
SNX13-206ENST00000474067 NCR2O95944 276 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 AMTP48728 403 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 TSKUQ8WUA8 353 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 OSTCQ9NRP0 149 aa13.51□□□□□ -0.25
SNX13-206ENST00000474067 PCLOQ9Y6V0 5065 aa13.5□□□□□ -0.25
SNX13-206ENST00000474067 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 HLA-DQA1P01909 254 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
SNX13-206ENST00000474067 REG3AQ06141 175 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 WFDC2Q14508 124 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 PEA15Q15121 130 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms