RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 TEN1Q86WV5 123 aa15.8■□□□□ 0.12
RNF220-209ENST00000474064 ID1P41134 155 aa15.79■□□□□ 0.12
RNF220-209ENST00000474064 SLURP1P55000 103 aa15.79■□□□□ 0.12
RNF220-209ENST00000474064 SRSF9Q13242 221 aaKnown RBP eCLIP15.79■□□□□ 0.12
RNF220-209ENST00000474064 SCGB1D4Q6XE38 83 aa15.79■□□□□ 0.12
RNF220-209ENST00000474064 Q8N2B8 174 aa15.79■□□□□ 0.12
RNF220-209ENST00000474064 LENEPQ9Y5L5 61 aa15.79■□□□□ 0.12
RNF220-209ENST00000474064 H3BVH4 76 aa15.78■□□□□ 0.12
RNF220-209ENST00000474064 DNAJC9-AS1A6NH13 148 aa15.78■□□□□ 0.12
RNF220-209ENST00000474064 A6NJY4 79 aa15.78■□□□□ 0.12
RNF220-209ENST00000474064 YAE1D1Q9NRH1 226 aa15.78■□□□□ 0.12
RNF220-209ENST00000474064 UBE2D1P51668 147 aa15.77■□□□□ 0.11
RNF220-209ENST00000474064 RNF152Q8N8N0 203 aa15.77■□□□□ 0.11
RNF220-209ENST00000474064 KIR2DL4Q99706 377 aa15.77■□□□□ 0.11
RNF220-209ENST00000474064 FASNP49327 2511 aaKnown RBP15.76■□□□□ 0.11
RNF220-209ENST00000474064 ZNF815PA8K554 130 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 IGKV3-20P01619 116 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 UBE2D3P61077 147 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 UBE2D2P62837 147 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 PRADC1Q9BSG0 188 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 SORL1Q92673 2214 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 MTORP42345 2549 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 HECTD1Q9ULT8 2610 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 TRAV12-1A0A0B4J245 112 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 TRAV21A0A0B4J279 112 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 B5MCH6 92 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 GAGE5Q13069 117 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 GAGE6Q13070 117 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 PLEKHB2Q96CS7 222 aa15.76■□□□□ 0.11
RNF220-209ENST00000474064 SPANXN1Q5VSR9 72 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 ZFAND6Q6FIF0 208 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 ESM1Q9NQ30 184 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 KRTAP1-1Q07627 177 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 Q6ZSV7 163 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 C11orf44Q8N8P7 122 aa15.75■□□□□ 0.11
RNF220-209ENST00000474064 TCL1BO95988 128 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 ANXA2RQ3ZCQ2 193 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 TEX29Q8N6K0 151 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 FAM19A4Q96LR4 140 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 SCGB3A1Q96QR1 104 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 SETD2Q9BYW2 2564 aaPredicted RBP15.74■□□□□ 0.11
RNF220-209ENST00000474064 LGALS9O00182 355 aa15.74■□□□□ 0.11
RNF220-209ENST00000474064 S100A4P26447 101 aaKnown RBP15.73■□□□□ 0.11
RNF220-209ENST00000474064 CD7P09564 240 aa15.73■□□□□ 0.11
RNF220-209ENST00000474064 KLHL30-AS1Q8NEE0 82 aa15.73■□□□□ 0.11
RNF220-209ENST00000474064 A8MWV9 139 aa15.72■□□□□ 0.11
RNF220-209ENST00000474064 GNRH2O43555 120 aa15.72■□□□□ 0.11
RNF220-209ENST00000474064 SNRPD3P62318 126 aaKnown RBP15.72■□□□□ 0.11
RNF220-209ENST00000474064 NEXN-AS1Q8NBZ9 246 aa15.72■□□□□ 0.11
RNF220-209ENST00000474064 K7EQG2 157 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 M0R381 172 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 TMEM86BQ8N661 226 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 ANKRD29Q8N6D5 301 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 VCX2Q9H322 139 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 SMIM2Q9BVW6 85 aa15.71■□□□□ 0.11
RNF220-209ENST00000474064 ANK3Q12955 4377 aaKnown RBP15.7■□□□□ 0.1
RNF220-209ENST00000474064 LYRM7Q5U5X0 104 aa15.7■□□□□ 0.1
RNF220-209ENST00000474064 NDUFA11Q86Y39 141 aa15.7■□□□□ 0.1
RNF220-209ENST00000474064 NHLRC4P0CG21 123 aaPredicted RBP15.7■□□□□ 0.1
RNF220-209ENST00000474064 NOTCH2Q04721 2471 aa15.69■□□□□ 0.1
RNF220-209ENST00000474064 TRAV12-3A0A0B4J271 114 aa15.69■□□□□ 0.1
RNF220-209ENST00000474064 A0A1W2PRX2 142 aa15.69■□□□□ 0.1
RNF220-209ENST00000474064 ASIPP42127 132 aa15.69■□□□□ 0.1
RNF220-209ENST00000474064 RASL10AQ92737 203 aa15.69■□□□□ 0.1
RNF220-209ENST00000474064 TRAV12-2A0A075B6T6 113 aa15.68■□□□□ 0.1
RNF220-209ENST00000474064 C4orf3Q8WVX3 66 aa15.68■□□□□ 0.1
RNF220-209ENST00000474064 TOMM6Q96B49 74 aa15.68■□□□□ 0.1
RNF220-209ENST00000474064 APRG1Q8IVJ8 170 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 BAALCQ8WXS3 180 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 TRBV20-1A0A075B6N2 111 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 A0A0J9YX75 114 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 TMEM262E9PQX1 116 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 SBSPONQ8IVN8 264 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 PHLDA3Q9Y5J5 127 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 KLLNB2CW77 178 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 SCGB1C2P0DMR2 95 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 ORMDL2Q53FV1 153 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 SMR3AQ99954 134 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 CITED1Q99966 193 aa15.67■□□□□ 0.1
RNF220-209ENST00000474064 TRBV7-9A0A0J9YWB2 115 aa15.65■□□□□ 0.1
RNF220-209ENST00000474064 CFC1BP0CG36 223 aa15.65■□□□□ 0.1
RNF220-209ENST00000474064 CFC1P0CG37 223 aa15.65■□□□□ 0.1
RNF220-209ENST00000474064 CFAP161Q6P656 301 aa15.65■□□□□ 0.1
RNF220-209ENST00000474064 FAM159AQ6UWV7 190 aa15.65■□□□□ 0.1
RNF220-209ENST00000474064 IGHV4-4A0A075B6R2 117 aa15.64■□□□□ 0.09
RNF220-209ENST00000474064 SUMO2P61956 95 aaKnown RBP15.64■□□□□ 0.09
RNF220-209ENST00000474064 SPINK13Q1W4C9 94 aa15.64■□□□□ 0.09
RNF220-209ENST00000474064 C2orf66Q6UXQ4 117 aa15.64■□□□□ 0.09
RNF220-209ENST00000474064 RNASE3P12724 160 aaKnown RBP15.63■□□□□ 0.09
RNF220-209ENST00000474064 WNK1Q9H4A3 2382 aa15.63■□□□□ 0.09
RNF220-209ENST00000474064 A0A0J9YY99 117 aa15.63■□□□□ 0.09
RNF220-209ENST00000474064 EMP1P54849 157 aa15.63■□□□□ 0.09
RNF220-209ENST00000474064 C14orf178Q8N769 122 aaPredicted RBP15.63■□□□□ 0.09
RNF220-209ENST00000474064 PEMTQ9UBM1 199 aa15.63■□□□□ 0.09
RNF220-209ENST00000474064 RHODO00212 210 aa15.62■□□□□ 0.09
RNF220-209ENST00000474064 GAGE2BQ13066 116 aa15.62■□□□□ 0.09
RNF220-209ENST00000474064 GAGE2EQ4V326 116 aa15.62■□□□□ 0.09
RNF220-209ENST00000474064 C10orf126Q8N4M7 172 aa15.62■□□□□ 0.09
RNF220-209ENST00000474064 RPL39LQ96EH5 51 aaKnown RBP15.62■□□□□ 0.09
RNF220-209ENST00000474064 GAGE2DQ9UEU5 116 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms