RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-205	ENST00000473344	VGLL1	Q99990	258 aa		4.97	□□□□□ -1.61
CKS1B-205	ENST00000473344	SPX	Q9BT56	116 aa		4.97	□□□□□ -1.61
CKS1B-205	ENST00000473344	ENY2	Q9NPA8	101 aa		4.97	□□□□□ -1.61
CKS1B-205	ENST00000473344	XCL2	Q9UBD3	114 aa		4.97	□□□□□ -1.61
CKS1B-205	ENST00000473344	HLA-DRB4	X5D2U9	266 aa		4.97	□□□□□ -1.61
CKS1B-205	ENST00000473344	IGHV3OR16-12	A0A075B7B8	117 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344		A0A0G2JRQ6	117 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344	PGPEP1L	A6NFU8	196 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344		F2Z2F3	143 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344		K7EN84	100 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344	NXPH3	O95157	252 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344	KIAA1644	Q3SXP7	199 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344		Q6AWC8	147 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344		Q6ZVH6	145 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344	ERG28	Q9UKR5	140 aa		4.96	□□□□□ -1.62
CKS1B-205	ENST00000473344	TRBV20OR9-2	A0A075B6H5	130 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344		A0A087X0K7	114 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGHV1-24	A0A0C4DH33	117 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	TEX48	A0A1B0GUV7	120 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGKV1-39	P01597	117 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGKV1D-39	P04432	117 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344		P0C879	139 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	HTN3	P15516	51 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	IZUMO4	Q1ZYL8	232 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	C1orf134	Q5TEV5	83 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344		Q6ZRM9	215 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	S100A7A	Q86SG5	101 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	ZNF575	Q86XF7	245 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	OR1L4	Q8NGR5	311 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	DAZAP1	Q96EP5	407 aa	Known RBP	4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	SLC25A2	Q9BXI2	301 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	AP5S1	Q9NUS5	200 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	ZNF492	Q9P255	531 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	LRP1B	Q9NZR2	4599 aa		4.95	□□□□□ -1.62
CKS1B-205	ENST00000473344	SMIM9	A6NGZ8	99 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	FBLL1	A6NHQ2	334 aa	Known RBP	4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	C16orf90	A8MZG2	172 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	INS-IGF2	F8WCM5	200 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344		H3BMM0	161 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGKV3-20	P01619	116 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	RNASE2	P10153	161 aa	Known RBP	4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	RIG	Q13278	110 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	GAGE13	Q4V321	117 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	SIGLEC15	Q6ZMC9	328 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	ANAPC13	Q9BS18	74 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	HEYL	Q9NQ87	328 aa	Predicted RBP	4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344	HERC1	Q15751	4861 aa		4.94	□□□□□ -1.62
CKS1B-205	ENST00000473344		A0A1B0GXF2	115 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	hDV102S1	A0JD36	115 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344		H3BMG7	143 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGKV1-17	P01599	117 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	APOB	P04114	4563 aa	Known RBP	4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	IL4	P05112	153 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	SPINK8	P0C7L1	97 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	FAM222A	Q5U5X8	452 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344		Q6ZR54	194 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	C2orf91	Q6ZV80	131 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	MAPKAPK5-AS1	Q8N8E1	139 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	NUP35	Q8NFH5	326 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	GTSF1	Q8WW33	167 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	GLMP	Q8WWB7	406 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	IGF2BP2-AS1	Q96M15	143 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	TMEM126A	Q9H061	195 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	RPP21	Q9H633	154 aa	Known RBP	4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	MRPL36	Q9P0J6	103 aa	Known RBP	4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	DKK2	Q9UBU2	259 aa		4.93	□□□□□ -1.62
CKS1B-205	ENST00000473344	TRBV7-9	A0A0J9YWB2	115 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	CDK2AP2	O75956	126 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	GATA2	P23769	480 aa	Predicted RBP	4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	ID1	P41134	155 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	FXYD7	P58549	80 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	PRSS3P2	Q8NHM4	247 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	C20orf173	Q96LM9	149 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	MGST2	Q99735	147 aa		4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	RNASE7	Q9H1E1	156 aa	Known RBP	4.92	□□□□□ -1.62
CKS1B-205	ENST00000473344	DNAH5	Q8TE73	4624 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	HIGD1C	A8MV81	97 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344		E9PLD3	99 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	PEX7	O00628	323 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	BUB3	O43684	328 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	SPINK4	O60575	86 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	APOM	O95445	188 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344		P01737	135 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	GCSH	P23434	173 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	ASIP	P42127	132 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	DAD1	P61803	113 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	RRN3P1	Q2M238	152 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	GDF5OS	Q5U4N7	250 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	MIC13	Q5XKP0	118 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344		Q6Q795	121 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	C15orf53	Q8NAA6	179 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	GATD1	Q8NB37	220 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	PPDPFL	Q8WWR9	84 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	FMC1	Q96HJ9	113 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	TM2D2	Q9BX73	214 aa		4.91	□□□□□ -1.62
CKS1B-205	ENST00000473344	TRBV20-1	A0A075B6N2	111 aa		4.9	□□□□□ -1.63
CKS1B-205	ENST00000473344	GAGE12J	A6NER3	117 aa		4.9	□□□□□ -1.63
CKS1B-205	ENST00000473344		M0QXV9	152 aa		4.9	□□□□□ -1.63
CKS1B-205	ENST00000473344	ATP5L	O75964	103 aa		4.9	□□□□□ -1.63

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