RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CNBPP62633 177 aaKnown RBP5.86□□□□□ -1.47
VCL-204ENST00000472585 RBX1P62877 108 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 RPL36AP83881 106 aaKnown RBP5.86□□□□□ -1.47
VCL-204ENST00000472585 RPL19P84098 196 aaKnown RBP5.86□□□□□ -1.47
VCL-204ENST00000472585 MIAQ16674 131 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 Q86TA4 180 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 LINC00269Q8N2A0 174 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
VCL-204ENST00000472585 GFRA4Q9GZZ7 299 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 IGLV10-54A0A075B6I4 117 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 MUC21A0A0G2JKD1 596 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 PHOX2AO14813 284 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 GAGE6Q13070 117 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 ZNF674Q2M3X9 581 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 WDR73Q6P4I2 378 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 MARVELD1Q9BSK0 173 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 CHCHD5Q9BSY4 110 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 PHLDA3Q9Y5J5 127 aa5.85□□□□□ -1.47
VCL-204ENST00000472585 MUC21A0A140T8X8 626 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 PEX7O00628 323 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 CXorf1O96002 111 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 TPT1P13693 172 aaKnown RBP5.84□□□□□ -1.47
VCL-204ENST00000472585 UBE2G2P60604 165 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 RAB4BP61018 213 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 Q5BKY6 102 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 OR10AG1Q8NH19 301 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 ENKURQ8TC29 256 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 PSMG3Q9BT73 122 aaPredicted RBP5.84□□□□□ -1.47
VCL-204ENST00000472585 TMEM167BQ9NRX6 74 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
VCL-204ENST00000472585 FAM74A7A6NL05 159 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 SSNA1O43805 119 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 UPK1BO75841 260 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 IFNA7P01567 189 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 DEFA3P59666 94 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 FAM162BQ5T6X4 162 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 ZFP82Q8N141 532 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 INO80EQ8NBZ0 244 aaPredicted RBP5.83□□□□□ -1.48
VCL-204ENST00000472585 CLRN3Q8NCR9 226 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 VAX2Q9UIW0 290 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
VCL-204ENST00000472585 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 hDV102S1A0JD36 115 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 PET100P0DJ07 73 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 RAB5CP51148 216 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 SERF2P84101 59 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 REG3AQ06141 175 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 GTSF1Q8WW33 167 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 ACTR3CQ9C0K3 210 aaPredicted RBP5.82□□□□□ -1.48
VCL-204ENST00000472585 ZFP30Q9Y2G7 519 aa5.82□□□□□ -1.48
VCL-204ENST00000472585 IGHV3-64A0A075B6Q5 118 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 TRBV6-1A0A0K0K1D8 114 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 LTAP01374 205 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 ZNF56Q15929 161 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 PRSS3P2Q8NHM4 247 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 HIST1H2BAQ96A08 127 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 DERL1Q9BUN8 251 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 ZNF471Q9BX82 626 aaPredicted RBP5.81□□□□□ -1.48
VCL-204ENST00000472585 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
VCL-204ENST00000472585 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.8□□□□□ -1.48
VCL-204ENST00000472585 MBP02144 154 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 SSTP61278 116 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 PRR3P79522 188 aaKnown RBP5.8□□□□□ -1.48
VCL-204ENST00000472585 COX6A2Q02221 97 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 SRSF9Q13242 221 aaKnown RBP eCLIP5.8□□□□□ -1.48
VCL-204ENST00000472585 IQCJQ1A5X6 159 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 RPL7L1Q6DKI1 246 aaKnown RBP5.8□□□□□ -1.48
VCL-204ENST00000472585 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 AQP10Q96PS8 301 aa5.8□□□□□ -1.48
VCL-204ENST00000472585 CTXND1A0A1B0GTU2 59 aa5.79□□□□□ -1.48
VCL-204ENST00000472585 SNAI2O43623 268 aa5.79□□□□□ -1.48
VCL-204ENST00000472585 LINC00299Q6ZSB3 139 aa5.79□□□□□ -1.48
VCL-204ENST00000472585 FMC1Q96HJ9 113 aa5.79□□□□□ -1.48
VCL-204ENST00000472585 F5H697 171 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 M0QY20 66 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 LYPD6BQ8NI32 183 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 S100ZQ8WXG8 99 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 MUC2Q02817 5179 aa5.78□□□□□ -1.48
VCL-204ENST00000472585 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 TRBV25-1A0A075B6N4 114 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 TRAV8-4A0A0B4J246 113 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 A0A1B0GUV1 79 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 P01737 135 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 OR5AL1P0C617 328 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 PKIAP61925 76 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 MAJINQ3KP22 176 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 NKX6-2Q9C056 277 aaPredicted RBP5.77□□□□□ -1.49
VCL-204ENST00000472585 ALG5Q9Y673 324 aa5.77□□□□□ -1.49
VCL-204ENST00000472585 A0A096LNI7 61 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 IGHV1-24A0A0C4DH33 117 aa5.76□□□□□ -1.49
VCL-204ENST00000472585 IGKV2-24A0A0C4DH68 120 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms