RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CCL3P10147 92 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CCL5P13501 91 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 PEBP1P30086 187 aaKnown RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 RHOHQ15669 191 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 KISS1Q15726 138 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 TMEM170BQ5T4T1 132 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CHCHD1Q96BP2 118 aaKnown RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 TVP23CQ96ET8 276 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 ODF3Q96PU9 254 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 NABP2Q9BQ15 211 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CHCHD7Q9BUK0 85 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 TTTY13Q9BZ97 58 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 NXT2Q9NPJ8 142 aaKnown RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 TRPM2O94759 1503 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CPS1P31327 1500 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 ANKRD17O75179 2603 aaKnown RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 LAMB2P55268 1798 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 USP9XQ93008 2570 aaPredicted RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 PLXNA2O75051 1894 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 FASNP49327 2511 aaKnown RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 USP32Q8NFA0 1604 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 LOC285556D6RIA3 1793 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 ZNF292O60281 2723 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 FXYD6-FXYD2A0A087WZ82 144 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 IGHV3-49A0A0A0MS15 119 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 IGHV1-24A0A0C4DH33 117 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 CRYM-AS1A6NIL9 109 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 BPY2O14599 106 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 CGB3P0DN86 165 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 CGB7P0DN87 165 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 COX8AP10176 69 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 SMIM11AP58511 58 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 UBE2G1P62253 170 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 MIAQ16674 131 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 PYDC2Q56P42 97 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 RNASE13Q5GAN3 156 aaKnown RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 SPANXN1Q5VSR9 72 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 SLC48A1Q6P1K1 146 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 C16orf47Q6ZP98 133 aaPredicted RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 TMEM256Q8N2U0 113 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 CNEP1R1Q8N9A8 125 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 FXYD6Q9H0Q3 95 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 ZNRD1Q9P1U0 126 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 TMEM14AQ9Y6G1 99 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 FLNBO75369 2602 aaKnown RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 C5orf42Q9H799 3197 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 LTBP2Q14767 1821 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 THADAQ6YHU6 1953 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 FMN2Q9NZ56 1722 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 USP34Q70CQ2 3546 aa1.88□□□□□ -2.11
CD46-213ENST00000471987 CICQ96RK0 1608 aaPredicted RBP1.88□□□□□ -2.11
CD46-213ENST00000471987 C5P01031 1676 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 EPG5Q9HCE0 2579 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 TRAV13-2A0A0B4J235 113 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 IGHV5-10-1A0A0J9YXX1 117 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 TCRBV4S1A1TA0A5B7 111 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 IGHV1-69P01742 117 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 MSMBP08118 114 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 SLC25A16P16260 332 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 CMC4P56277 68 aaPredicted RBP1.87□□□□□ -2.11
CD46-213ENST00000471987 RBM3P98179 157 aaKnown RBP1.87□□□□□ -2.11
CD46-213ENST00000471987 TJP1Q07157 1748 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 CYP2G1PQ6ZSU1 146 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 C2orf91Q6ZV80 131 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 SMCR5Q8TEV8 140 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 Q96M85 177 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 RETNLBQ9BQ08 111 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 SLC50A1Q9BRV3 221 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 CST11Q9H112 138 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 NHP2Q9NX24 153 aaKnown RBP1.87□□□□□ -2.11
CD46-213ENST00000471987 HIGD1BQ9P298 99 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 REV3LO60673 3130 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 ANKRD12Q6UB98 2062 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 BPTFQ12830 3046 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
CD46-213ENST00000471987 C3P01024 1663 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 GPATCH8Q9UKJ3 1502 aaKnown RBP1.86□□□□□ -2.11
CD46-213ENST00000471987 MROH2BQ7Z745 1585 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 COL14A1Q05707 1796 aaKnown RBP1.86□□□□□ -2.11
CD46-213ENST00000471987 TRAV3A0A0B4J244 114 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 A8MUU9 505 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 H7BZZ5 65 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 GNRH2O43555 120 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 CPSF4O95639 269 aaKnown RBP1.86□□□□□ -2.11
CD46-213ENST00000471987 IGLV3-25P01717 112 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 APCSP02743 223 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 C3orf79P0CE67 100 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 IGHV1-8P0DP01 117 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 EFNA4P52798 201 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 ZNF816Q0VGE8 651 aaPredicted RBP1.86□□□□□ -2.11
CD46-213ENST00000471987 KLKP1Q107X0 134 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 ESRGQ1W209 222 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 DYNAPQ8N1N2 210 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 LINC00269Q8N2A0 174 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 DYNLRB2Q8TF09 96 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms