RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 LELP1Q5T871 98 aa10.37□□□□□ -0.75
SNX13-205ENST00000471744 K7EP13 123 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 M0R2N4 97 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 MT-ND4LP03901 98 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 UBE2D3P61077 147 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 UBE2D2P62837 147 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 ANAPC16Q96DE5 110 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
SNX13-205ENST00000471744 F8W036 122 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 M0QY20 66 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
SNX13-205ENST00000471744 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 FRZBQ92765 325 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 SEC11CQ9BY50 192 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 Q9UF83 564 aa10.35□□□□□ -0.75
SNX13-205ENST00000471744 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 A0A1B0GW15 77 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 TMEM97Q5BJF2 176 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 TMEM191AQ9H0A3 160 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
SNX13-205ENST00000471744 HYDINQ4G0P3 5121 aa10.33□□□□□ -0.76
SNX13-205ENST00000471744 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
SNX13-205ENST00000471744 DAZ4Q86SG3 579 aaKnown RBP10.33□□□□□ -0.76
SNX13-205ENST00000471744 DAZ3Q9NR90 486 aaKnown RBP10.33□□□□□ -0.76
SNX13-205ENST00000471744 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 S100A8P05109 93 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 ADCYAP1P18509 176 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 C1orf134Q5TEV5 83 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 NIT2Q9NQR4 276 aa10.32□□□□□ -0.76
SNX13-205ENST00000471744 LINC01556Q5JQF7 62 aa10.31□□□□□ -0.76
SNX13-205ENST00000471744 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
SNX13-205ENST00000471744 KCNIP4Q6PIL6 250 aa10.3□□□□□ -0.76
SNX13-205ENST00000471744 ATP5L2Q7Z4Y8 100 aa10.3□□□□□ -0.76
SNX13-205ENST00000471744 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
SNX13-205ENST00000471744 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
SNX13-205ENST00000471744 HBBP68871 147 aa10.29□□□□□ -0.76
SNX13-205ENST00000471744 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
SNX13-205ENST00000471744 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
SNX13-205ENST00000471744 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
SNX13-205ENST00000471744 TRBV6-8A0A0A6YYG3 113 aa10.28□□□□□ -0.76
SNX13-205ENST00000471744 PKIAP61925 76 aa10.28□□□□□ -0.76
SNX13-205ENST00000471744 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
SNX13-205ENST00000471744 IMMP2LQ96T52 175 aa10.28□□□□□ -0.76
SNX13-205ENST00000471744 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
SNX13-205ENST00000471744 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
SNX13-205ENST00000471744 TRAV26-2A0A0B4J265 109 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 PPP1R17O96001 155 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 RAB4AP20338 218 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 CAMPP49913 170 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 CHCHD7Q9BUK0 85 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
SNX13-205ENST00000471744 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
SNX13-205ENST00000471744 FAM104BQ5XKR9 115 aa10.26□□□□□ -0.77
SNX13-205ENST00000471744 MRPL54Q6P161 138 aaKnown RBP10.26□□□□□ -0.77
SNX13-205ENST00000471744 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
SNX13-205ENST00000471744 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
SNX13-205ENST00000471744 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
SNX13-205ENST00000471744 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 RTL8CO15255 209 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 NIT1Q86X76 327 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
SNX13-205ENST00000471744 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 COTL1Q14019 142 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 LAGE3Q14657 143 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 RHEBQ15382 184 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 IQCJQ1A5X6 159 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
SNX13-205ENST00000471744 TMEM242Q9NWH2 141 aa10.24□□□□□ -0.77
SNX13-205ENST00000471744 TRAV9-1A0A075B6T8 112 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 A0A087WX48 190 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 NCR2O95944 276 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 IGHV3-30-5P0DP03 117 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 ELOBQ15370 118 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
SNX13-205ENST00000471744 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
SNX13-205ENST00000471744 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
SNX13-205ENST00000471744 S100PP25815 95 aa10.22□□□□□ -0.77
SNX13-205ENST00000471744 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
SNX13-205ENST00000471744 CLRN3Q8NCR9 226 aa10.22□□□□□ -0.77
SNX13-205ENST00000471744 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
SNX13-205ENST00000471744 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
SNX13-205ENST00000471744 PPBPP02775 128 aa10.21□□□□□ -0.77
SNX13-205ENST00000471744 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.77
SNX13-205ENST00000471744 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.77
SNX13-205ENST00000471744 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
SNX13-205ENST00000471744 I3L3M4 83 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms