RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ARFGEF1Q9Y6D6 1849 aa-0.64□□□□□ -2.51
RBM39-228ENST00000471635 MYH9P35579 1960 aaKnown RBP-0.65□□□□□ -2.51
RBM39-228ENST00000471635 IBTKQ9P2D0 1353 aaPredicted RBP-0.65□□□□□ -2.51
RBM39-228ENST00000471635 CLPSL1A2RUU4 121 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 M0R3E3 92 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 NBEAP1P0C6P0 100 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 S100A5P33763 92 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 C10orf82Q8WW14 230 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 WFDC6Q9BQY6 131 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 ZMYM4Q5VZL5 1548 aa-0.65□□□□□ -2.51
RBM39-228ENST00000471635 SIPA1L3O60292 1781 aaPredicted RBP-0.65□□□□□ -2.51
RBM39-228ENST00000471635 PARP14Q460N5 1801 aa-0.66□□□□□ -2.51
RBM39-228ENST00000471635 TRBV20-1A0A075B6N2 111 aa-0.66□□□□□ -2.52
RBM39-228ENST00000471635 TRAV1-2A0A0B4J238 106 aa-0.66□□□□□ -2.52
RBM39-228ENST00000471635 A0A0D9SFI3 127 aa-0.66□□□□□ -2.52
RBM39-228ENST00000471635 TRBV10-3A0A0K0K1G6 114 aa-0.66□□□□□ -2.52
RBM39-228ENST00000471635 SPINK8P0C7L1 97 aa-0.66□□□□□ -2.52
RBM39-228ENST00000471635 FAT2Q9NYQ8 4349 aa-0.67□□□□□ -2.52
RBM39-228ENST00000471635 BSNQ9UPA5 3926 aa-0.67□□□□□ -2.52
RBM39-228ENST00000471635 UBE2D1P51668 147 aa-0.67□□□□□ -2.52
RBM39-228ENST00000471635 MIC13Q5XKP0 118 aa-0.67□□□□□ -2.52
RBM39-228ENST00000471635 TENM2Q9NT68 2774 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 MYH13Q9UKX3 1938 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 PPRC1Q5VV67 1664 aaKnown RBP-0.68□□□□□ -2.52
RBM39-228ENST00000471635 M0R129 80 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 PIRTP0C851 137 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 CCDC153Q494R4 210 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 MORN2Q502X0 79 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 C9orf116Q5BN46 136 aaPredicted RBP-0.68□□□□□ -2.52
RBM39-228ENST00000471635 Q5VSD8 79 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 SPANXN1Q5VSR9 72 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 VSTM2AQ8TAG5 236 aa-0.68□□□□□ -2.52
RBM39-228ENST00000471635 GVINP1Q7Z2Y8 2422 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 GNG14A0A1W2PPG7 69 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 H0YJX3 145 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 SELENOSQ9BQE4 189 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 CSPG4Q6UVK1 2322 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 WNK1Q9H4A3 2382 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 IFT172Q9UG01 1749 aa-0.69□□□□□ -2.52
RBM39-228ENST00000471635 FAM236AA0A1B0GUQ0 79 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 FAM236BA0A1B0GV22 79 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 PIN1P1O15428 100 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 PITX3O75364 302 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 NCS1P62166 190 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 SPAG11BQ08648 103 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 Q5VV11 94 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 RPRMQ9NS64 109 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 SPANXCQ9NY87 97 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 USF3Q68DE3 2245 aa-0.7□□□□□ -2.52
RBM39-228ENST00000471635 PIEZO2Q9H5I5 2752 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 TRAV22A0A0B4J277 110 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 DBIP07108 87 aaKnown RBP-0.71□□□□□ -2.52
RBM39-228ENST00000471635 SPRR1AP35321 89 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 UBE2G1P62253 170 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 SAR1AQ9NR31 198 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 CDK5RAP2Q96SN8 1893 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 COL6A3P12111 3177 aa-0.71□□□□□ -2.52
RBM39-228ENST00000471635 IGLC6P0CF74 106 aa-0.72□□□□□ -2.52
RBM39-228ENST00000471635 ACANP16112 2415 aa-0.72□□□□□ -2.52
RBM39-228ENST00000471635 ADGRB1O14514 1584 aa-0.72□□□□□ -2.52
RBM39-228ENST00000471635 APOC4-APOC2K7ER74 178 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 RPL7L1Q6DKI1 246 aaKnown RBP-0.73□□□□□ -2.53
RBM39-228ENST00000471635 Q8IZM0 81 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 MMGT1Q8N4V1 131 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 AIF1LQ9BQI0 150 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 SPANXA1Q9NS26 97 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 SPTA1P02549 2419 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 ARHGEF10O15013 1369 aa-0.73□□□□□ -2.53
RBM39-228ENST00000471635 LAMC1P11047 1609 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 FAM92AA1XBS5 289 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 IFNA17P01571 189 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 HIST1H1AQ02539 215 aaPredicted RBP-0.74□□□□□ -2.53
RBM39-228ENST00000471635 CFAP126Q5VTH2 177 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 TAC4Q86UU9 113 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 BAGE3Q86Y29 109 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 SCN3BQ9NY72 215 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 OVOS2A0A0J9YW53 1432 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 ZNF609O15014 1411 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 OVOS2Q6IE36 1432 aa-0.74□□□□□ -2.53
RBM39-228ENST00000471635 A6NIN4 97 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 BCE1O60756 84 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 NEFHP12036 1026 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 ZNF818PQ6ZRF7 136 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 Q6ZUT4 128 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 TMEM2Q9UHN6 1383 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 LRRC37A3O60309 1634 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 PDZD2O15018 2839 aa-0.75□□□□□ -2.53
RBM39-228ENST00000471635 EP300Q09472 2414 aaPredicted RBP-0.76□□□□□ -2.53
RBM39-228ENST00000471635 TSPAN19P0C672 248 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 LINC00694P0DN24 101 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 SPTSSBQ8NFR3 76 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 NPVFQ9HCQ7 196 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 MRPL40Q9NQ50 206 aaKnown RBP-0.76□□□□□ -2.53
RBM39-228ENST00000471635 SPCS1Q9Y6A9 102 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 LINC00312Q9Y6C7 94 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 DISP2A7MBM2 1401 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 DAPK1P53355 1430 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 PLXNB2O15031 1838 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 MYH6P13533 1939 aa-0.76□□□□□ -2.53
RBM39-228ENST00000471635 WNK3Q9BYP7 1800 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms