RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RPL36ALQ969Q0 106 aaKnown RBP10.13□□□□□ -0.79
COL1A1-203ENST00000471344 TMEM70Q9BUB7 260 aa10.13□□□□□ -0.79
COL1A1-203ENST00000471344 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
COL1A1-203ENST00000471344 PDE6DO43924 150 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 OR5AL1P0C617 328 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 RAB4BP61018 213 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 OR10G8Q8NGN5 311 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 FRZBQ92765 325 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 URGCP-MRPS24S4R325 110 aa10.12□□□□□ -0.79
COL1A1-203ENST00000471344 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
COL1A1-203ENST00000471344 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
COL1A1-203ENST00000471344 UBE2WQ96B02 151 aa10.11□□□□□ -0.79
COL1A1-203ENST00000471344 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
COL1A1-203ENST00000471344 A0A087WX48 190 aa10.1□□□□□ -0.79
COL1A1-203ENST00000471344 K7EN84 100 aa10.1□□□□□ -0.79
COL1A1-203ENST00000471344 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
COL1A1-203ENST00000471344 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
COL1A1-203ENST00000471344 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 C19orf71A6NCJ1 209 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 C9JQL5 133 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 GNG4P50150 75 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
COL1A1-203ENST00000471344 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
COL1A1-203ENST00000471344 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
COL1A1-203ENST00000471344 F5H697 171 aa10.08□□□□□ -0.8
COL1A1-203ENST00000471344 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
COL1A1-203ENST00000471344 IGLC6P0CF74 106 aa10.08□□□□□ -0.8
COL1A1-203ENST00000471344 TAGLN2P37802 199 aaKnown RBP10.08□□□□□ -0.8
COL1A1-203ENST00000471344 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
COL1A1-203ENST00000471344 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
COL1A1-203ENST00000471344 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 CEBPGP53567 150 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 Q6ZSA8 131 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 Q8N976 141 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 OR2D3Q8NGH3 330 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 OCC1Q8TAD7 63 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 AP1S3Q96PC3 154 aa10.07□□□□□ -0.8
COL1A1-203ENST00000471344 EIF5A2Q9GZV4 153 aaKnown RBP10.07□□□□□ -0.8
COL1A1-203ENST00000471344 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 MGPP08493 103 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
COL1A1-203ENST00000471344 ELOBQ15370 118 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 RMI2Q96E14 147 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
COL1A1-203ENST00000471344 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
COL1A1-203ENST00000471344 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
COL1A1-203ENST00000471344 IFITM2Q01629 132 aa10.05□□□□□ -0.8
COL1A1-203ENST00000471344 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
COL1A1-203ENST00000471344 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.05□□□□□ -0.8
COL1A1-203ENST00000471344 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
COL1A1-203ENST00000471344 BIN3Q9NQY0 253 aa10.05□□□□□ -0.8
COL1A1-203ENST00000471344 XKRY2A2RUG3 117 aa10.04□□□□□ -0.8
COL1A1-203ENST00000471344 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
COL1A1-203ENST00000471344 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
COL1A1-203ENST00000471344 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
COL1A1-203ENST00000471344 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
COL1A1-203ENST00000471344 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
COL1A1-203ENST00000471344 M0QY20 66 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 GAGE6Q13070 117 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 NUDT10Q8NFP7 164 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 DEFB104AQ8WTQ1 72 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
COL1A1-203ENST00000471344 F2Z2F3 143 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 P01737 135 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 CRPP02741 224 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 PKIAP61925 76 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 CACNG7P62955 275 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 SCXQ7RTU7 201 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 SMIM7Q9BQ49 75 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 C1orf43Q9BWL3 253 aa10.02□□□□□ -0.81
COL1A1-203ENST00000471344 HLA-DQA1P01909 254 aa10.01□□□□□ -0.81
COL1A1-203ENST00000471344 RBX1P62877 108 aa10.01□□□□□ -0.81
COL1A1-203ENST00000471344 Q0VG73 95 aa10.01□□□□□ -0.81
COL1A1-203ENST00000471344 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
COL1A1-203ENST00000471344 H7C1H1 209 aa10□□□□□ -0.81
COL1A1-203ENST00000471344 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 ZNF727A8MUV8 499 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
COL1A1-203ENST00000471344 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
COL1A1-203ENST00000471344 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
COL1A1-203ENST00000471344 TRGC1P0CF51 173 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 NTF3P20783 257 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 CTRLP40313 264 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
COL1A1-203ENST00000471344 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms