RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ALX1Q15699 326 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 H1FX-AS1Q4G0G2 97 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 LINC01554Q52M75 96 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 BRMS1LQ5PSV4 323 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 SFXN4Q6P4A7 337 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 CSAG1Q6PB30 78 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 LYPD5Q6UWN5 251 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 C3orf62Q6ZUJ4 267 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 VMO1Q7Z5L0 202 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TAC4Q86UU9 113 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TTC9CQ8N5M4 171 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 CCL4L1Q8NHW4 92 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TEX47Q8TBZ9 253 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TOMM6Q96B49 74 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 SH3BGRL3Q9H299 93 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 OR51V1Q9H2C8 321 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 CHMP4BQ9H444 224 aaKnown RBP-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 CMTM6Q9NX76 183 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 ORMDL1Q9P0S3 153 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 FBXO5Q9UKT4 447 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 PYCARDQ9ULZ3 195 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 V9GYQ6 96 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 V9GYY5 206 aaPredicted RBP-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 A0A096LPF7 62 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 OR4C46A6NHA9 309 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 F8WEM9 126 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 M0R1W7 72 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 KPNA3O00505 521 aaPredicted RBP-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 CXCR6O00574 342 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 CALUO43852 315 aaPredicted RBP-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 AHSA1O95433 338 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 ZNF682O95780 498 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 DHFRP00374 187 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 OR5G3P0C626 314 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 MYL12AP19105 171 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 CDC42P60953 191 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 COX6A2Q02221 97 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 AESQ08117 197 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 Q0VG73 95 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 MINOS1Q5TGZ0 78 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 C22orf39Q6P5X5 142 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 CLPSL2Q6UWE3 100 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 SSBP3-AS1Q7Z2R9 100 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 LINC00301Q8NCQ3 95 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 OR10AC1Q8NH08 325 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 VSTM2AQ8TAG5 236 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 LINC00052Q96N35 136 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 Q96NJ1 140 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 LPAR5Q9H1C0 372 aa-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 UTP11Q9Y3A2 253 aaKnown RBP-0.28□□□□□ -2.45
UBXN4-207ENST00000471246 A0A0D9SFI3 127 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 A0A0J9YY99 117 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 ERICH2A1L162 156 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 C7orf71A4D174 169 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 HSBP1L1C9JCN9 74 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 SSSCA1O60232 199 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 SULT1C4O75897 302 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 IGHV3-30P01768 117 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 IGHV3-33P01772 117 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 HLA-DRB1P01911 266 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 OR4E1P0C645 316 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 IGHV3-30-5P0DP03 117 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 DEFB130BP0DP73 79 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 DEFB130AP0DP74 79 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 BCL2P10415 239 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 SRIP30626 198 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 RPL5P46777 297 aaKnown RBP-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 NKX2-5P52952 324 aaPredicted RBP-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 FXYD6P3P58550 94 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 RAB5BP61020 215 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 B2MP61769 119 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 DYNLT1P63172 113 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 RRN3P1Q2M238 152 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 LPCAT3Q6P1A2 487 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 TRAPPC6BQ86SZ2 158 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 WFDC10BQ8IUB3 73 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 OR8J2Q8NGG1 315 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 OR2T35Q8NGX2 323 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 TMEM254Q8TBM7 123 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 AGPAT4-IT1Q9H0P7 198 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 NAA60Q9H7X0 242 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 C14orf132Q9NPU4 83 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 PRTFDC1Q9NRG1 225 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 ARL5AQ9Y689 179 aa-0.29□□□□□ -2.46
UBXN4-207ENST00000471246 TCHHQ07283 1943 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 A0A087WVE0 104 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 TRBV30A0A0K0K1B3 111 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 EXOC1LA0A1B0GW35 172 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 LINC01546A6NGU7 62 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 OOSP1A8MZH6 123 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 PPP5D1E7EU14 171 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 E7EUB6 86 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 OR2J2O76002 312 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 GADD45GO95257 159 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 APOEP02649 317 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 CD2P06729 351 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 S100A4P26447 101 aaKnown RBP-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 RNASE4P34096 147 aaKnown RBP-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 ETV6P41212 452 aa-0.3□□□□□ -2.46
UBXN4-207ENST00000471246 CDKN2CP42773 168 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms