RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 NBASA2RRP1 2371 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 KMT2BQ9UMN6 2715 aaPredicted RBP8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 NXPH4O95158 308 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 TRPT1Q86TN4 253 aaKnown RBP8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 ATP6V0E1O15342 81 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 MGPP08493 103 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3OR16-13A0A075B7E8 117 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3-74A0A0B4J1X5 117 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 USP17L23D6RBM5 183 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 Q5XG85 94 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
SRGAP3-204ENST00000470951 TSHBP01222 138 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 CFAP46Q8IYW2 2715 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 VCYO14598 125 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 P0DMU3 169 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM231AP0DMU4 169 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM231CP0DMU5 169 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 Q8N1Y9 231 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM19A4Q96LR4 140 aa8.52□□□□□ -1.05
SRGAP3-204ENST00000470951 RELNP78509 3460 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 SLC25A20O43772 301 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 J3QQQ9 107 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 LGALS3P17931 250 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 KIF25-AS1Q9Y6Z4 181 aa8.51□□□□□ -1.05
SRGAP3-204ENST00000470951 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 ATP5G1P05496 136 aa8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 FBXL19-AS1Q494R0 122 aa8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 Q6ZS46 218 aa8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 BBC3Q96PG8 261 aaPredicted RBP8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 AMELXQ99217 191 aa8.5□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM223BA6NKX1 122 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 IGF1P05019 195 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 CRYGAP11844 174 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 VPREB1P12018 145 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 RNASE3P12724 160 aaKnown RBP8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 LINC00315P59091 139 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM223AQ8IWN6 122 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 ABCA4P78363 2273 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 SOCS3O14543 225 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 UBE2E1P51965 193 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 LINC01560Q8TB33 94 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM208BQ5VWN6 2430 aa8.49□□□□□ -1.05
SRGAP3-204ENST00000470951 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 LEPROTO15243 131 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 IGHV1-69P01742 117 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 PRB1P04280 392 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 X6R8D5 127 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 MUC4Q99102 2169 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 A0A0J9YX75 114 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 FAM240AA0A1B0GVK7 77 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 G3V318 75 aa8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
SRGAP3-204ENST00000470951 NDUFA4O00483 81 aa8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 ATXN8Q156A1 80 aa8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 LY6HO94772 140 aa8.47□□□□□ -1.05
SRGAP3-204ENST00000470951 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 GNRH2O43555 120 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 KLRB1Q12918 225 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 RHOHQ15669 191 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.05
SRGAP3-204ENST00000470951 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 J3QL48 77 aa8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 LGALS9O00182 355 aa8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 TMEM258P61165 79 aa8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
SRGAP3-204ENST00000470951 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 SPRY2O43597 315 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 C19orf54Q5BKX5 351 aa8.45□□□□□ -1.06
SRGAP3-204ENST00000470951 V9GYY9 64 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms