RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 hDV102S1A0JD36 115 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 M0R381 172 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 HMGB3O15347 200 aaKnown RBP5.62□□□□□ -1.51
XRN1-208ENST00000470537 PTTG1O95997 202 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 CXorf1O96002 111 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 STAG3L2P0CL84 134 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 STAG3L3P0CL85 134 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 MPV17L2Q567V2 206 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 SUN5Q8TC36 379 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 PPP1R1CQ8WVI7 109 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 CCDC32Q9BV29 185 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 ZFP30Q9Y2G7 519 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 TRBV25-1A0A075B6N4 114 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 A0A1W2PRE2 83 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 KRBOX1C9JBD0 128 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 H0YIZ8 118 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 IFNA7P01567 189 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 GCHFRP30047 84 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 FAM162BQ5T6X4 162 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 WDR73Q6P4I2 378 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 LINC00269Q8N2A0 174 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 SMIM3Q9BZL3 60 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 ARL2-SNX15V9GYD0 113 aa5.61□□□□□ -1.51
XRN1-208ENST00000470537 A0A0J9YXV3 536 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 EIF3GO75821 320 aaKnown RBP eCLIP5.6□□□□□ -1.51
XRN1-208ENST00000470537 SIX6O95475 246 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 MPC2O95563 127 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 RAB2AP61019 212 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 SERF2P84101 59 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 HIST1H2BAQ96A08 127 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 ACTR3CQ9C0K3 210 aaPredicted RBP5.6□□□□□ -1.51
XRN1-208ENST00000470537 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 PKIGQ9Y2B9 76 aa5.6□□□□□ -1.51
XRN1-208ENST00000470537 F5H697 171 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 PANO1I0J062 215 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 M0R036 132 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 PHOX2AO14813 284 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 RBX1P62877 108 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 REG3AQ06141 175 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 ZNF56Q15929 161 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 ENKURQ8TC29 256 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 PSMG3Q9BT73 122 aaPredicted RBP5.59□□□□□ -1.51
XRN1-208ENST00000470537 DERL1Q9BUN8 251 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
XRN1-208ENST00000470537 GRIFINA4D1Z8 144 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 SMIM17P0DL12 118 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 UBE2G1P62253 170 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 COX8CQ7Z4L0 72 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 ZNF471Q9BX82 626 aaPredicted RBP5.58□□□□□ -1.52
XRN1-208ENST00000470537 VAX2Q9UIW0 290 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 TNFSF18Q9UNG2 199 aa5.58□□□□□ -1.52
XRN1-208ENST00000470537 TRAV34A0A0B4J273 112 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 IGHV1-24A0A0C4DH33 117 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 TRBV6-1A0A0K0K1D8 114 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 A0A1B0GUV1 79 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 H7C1H1 209 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 PEX7O00628 323 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 H2BFSP57053 126 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 PRR27Q6MZM9 219 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 FMC1Q96HJ9 113 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 KIF25-AS1Q9Y6Z4 181 aa5.57□□□□□ -1.52
XRN1-208ENST00000470537 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 SSNA1O43805 119 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 SH2D1AO60880 128 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 NDUFS6O75380 124 aaKnown RBP5.56□□□□□ -1.52
XRN1-208ENST00000470537 RPS10P46783 165 aaKnown RBP5.56□□□□□ -1.52
XRN1-208ENST00000470537 CRIP1P50238 77 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 PRR3P79522 188 aaKnown RBP5.56□□□□□ -1.52
XRN1-208ENST00000470537 GAGE6Q13070 117 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 IQCJQ1A5X6 159 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 ZNF674Q2M3X9 581 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 MAJINQ3KP22 176 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 LINC00299Q6ZSB3 139 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 Q86TA4 180 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 TCEAL7Q9BRU2 100 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 TNXBP22105 4242 aa5.56□□□□□ -1.52
XRN1-208ENST00000470537 TMSB15BA0A087X1C1 80 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 INMT-MINDY4F8WBC2 141 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 ATP6V0CP27449 155 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 COX6A2Q02221 97 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 SPANXN1Q5VSR9 72 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 STPG4Q8N801 248 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 S100ZQ8WXG8 99 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 WFDC1Q9HC57 220 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 NDUFA13Q9P0J0 144 aa5.55□□□□□ -1.52
XRN1-208ENST00000470537 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms