RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 GNG13Q9P2W3 67 aa20.54■□□□□ 0.88
HMG20B-209ENST00000470356 KIF25-AS1Q9Y6Z4 181 aa20.53■□□□□ 0.88
HMG20B-209ENST00000470356 SSTP61278 116 aa20.52■□□□□ 0.88
HMG20B-209ENST00000470356 LINC01620Q4KN68 170 aa20.52■□□□□ 0.88
HMG20B-209ENST00000470356 RAB5CP51148 216 aa20.51■□□□□ 0.87
HMG20B-209ENST00000470356 ENHOQ6UWT2 76 aa20.51■□□□□ 0.87
HMG20B-209ENST00000470356 SMIM17P0DL12 118 aa20.5■□□□□ 0.87
HMG20B-209ENST00000470356 MPV17L2Q567V2 206 aa20.5■□□□□ 0.87
HMG20B-209ENST00000470356 AP1S3Q96PC3 154 aa20.5■□□□□ 0.87
HMG20B-209ENST00000470356 C1orf43Q9BWL3 253 aa20.5■□□□□ 0.87
HMG20B-209ENST00000470356 VAX2Q9UIW0 290 aa20.5■□□□□ 0.87
HMG20B-209ENST00000470356 PLA2G1BP04054 148 aaKnown RBP20.49■□□□□ 0.87
HMG20B-209ENST00000470356 PKIAP61925 76 aa20.49■□□□□ 0.87
HMG20B-209ENST00000470356 TMEM97Q5BJF2 176 aa20.49■□□□□ 0.87
HMG20B-209ENST00000470356 C15orf54Q8N8G6 183 aa20.49■□□□□ 0.87
HMG20B-209ENST00000470356 CHCHD5Q9BSY4 110 aa20.49■□□□□ 0.87
HMG20B-209ENST00000470356 CENPWQ5EE01 88 aa20.48■□□□□ 0.87
HMG20B-209ENST00000470356 EIF5AL1Q6IS14 154 aaKnown RBP20.48■□□□□ 0.87
HMG20B-209ENST00000470356 LINC00528Q8N1L1 170 aa20.48■□□□□ 0.87
HMG20B-209ENST00000470356 IGLV2-8P01709 118 aa20.47■□□□□ 0.87
HMG20B-209ENST00000470356 CRPP02741 224 aa20.47■□□□□ 0.87
HMG20B-209ENST00000470356 ANGP03950 147 aaKnown RBP20.47■□□□□ 0.87
HMG20B-209ENST00000470356 NTM-AS1Q6ZSK4 140 aa20.47■□□□□ 0.87
HMG20B-209ENST00000470356 TEX46H3BTG2 121 aa20.46■□□□□ 0.87
HMG20B-209ENST00000470356 C14orf177Q52M58 125 aa20.46■□□□□ 0.87
HMG20B-209ENST00000470356 DAZAP1Q96EP5 407 aaKnown RBP20.46■□□□□ 0.87
HMG20B-209ENST00000470356 IGLC6P0CF74 106 aa20.45■□□□□ 0.86
HMG20B-209ENST00000470356 GZMBP10144 247 aa20.45■□□□□ 0.86
HMG20B-209ENST00000470356 RPS20P60866 119 aaKnown RBP20.45■□□□□ 0.86
HMG20B-209ENST00000470356 SCXQ7RTU7 201 aa20.44■□□□□ 0.86
HMG20B-209ENST00000470356 FER1L6-AS1Q8NA97 138 aa20.44■□□□□ 0.86
HMG20B-209ENST00000470356 OR2D3Q8NGH3 330 aa20.44■□□□□ 0.86
HMG20B-209ENST00000470356 SMIM12Q96EX1 92 aa20.44■□□□□ 0.86
HMG20B-209ENST00000470356 C19orf71A6NCJ1 209 aa20.43■□□□□ 0.86
HMG20B-209ENST00000470356 TPPP3Q9BW30 176 aa20.43■□□□□ 0.86
HMG20B-209ENST00000470356 RAB19A4D1S5 217 aa20.42■□□□□ 0.86
HMG20B-209ENST00000470356 GNG4P50150 75 aa20.42■□□□□ 0.86
HMG20B-209ENST00000470356 SULT1A2P50226 295 aa20.42■□□□□ 0.86
HMG20B-209ENST00000470356 MIAQ16674 131 aa20.42■□□□□ 0.86
HMG20B-209ENST00000470356 CHAC1Q9BUX1 264 aa20.42■□□□□ 0.86
HMG20B-209ENST00000470356 M0QY20 66 aa20.41■□□□□ 0.86
HMG20B-209ENST00000470356 MEF2BQ02080 365 aaPredicted RBP20.41■□□□□ 0.86
HMG20B-209ENST00000470356 TRBV25-1A0A075B6N4 114 aa20.4■□□□□ 0.86
HMG20B-209ENST00000470356 PDE6DO43924 150 aa20.4■□□□□ 0.86
HMG20B-209ENST00000470356 CACNG7P62955 275 aa20.4■□□□□ 0.86
HMG20B-209ENST00000470356 PRR34Q9NV39 138 aa20.4■□□□□ 0.86
HMG20B-209ENST00000470356 H7C1H1 209 aa20.39■□□□□ 0.85
HMG20B-209ENST00000470356 RBX1P62877 108 aa20.39■□□□□ 0.85
HMG20B-209ENST00000470356 MGPP08493 103 aa20.38■□□□□ 0.85
HMG20B-209ENST00000470356 IQCJQ1A5X6 159 aa20.38■□□□□ 0.85
HMG20B-209ENST00000470356 XKRY2A2RUG3 117 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 F2Z2F3 143 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 IFNA1P01562 189 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 P01737 135 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 GAGE6Q13070 117 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 MED9Q9NWA0 146 aa20.37■□□□□ 0.85
HMG20B-209ENST00000470356 TRBV20OR9-2A0A075B6H5 130 aa20.36■□□□□ 0.85
HMG20B-209ENST00000470356 USP17L23D6RBM5 183 aa20.36■□□□□ 0.85
HMG20B-209ENST00000470356 SUMO4Q6EEV6 95 aa20.36■□□□□ 0.85
HMG20B-209ENST00000470356 IGHV1-24A0A0C4DH33 117 aa20.35■□□□□ 0.85
HMG20B-209ENST00000470356 HLA-DQA1P01909 254 aa20.35■□□□□ 0.85
HMG20B-209ENST00000470356 CIRBP-AS1Q8TBR5 109 aa20.35■□□□□ 0.85
HMG20B-209ENST00000470356 BIN3Q9NQY0 253 aa20.35■□□□□ 0.85
HMG20B-209ENST00000470356 BCL2P10415 239 aa20.34■□□□□ 0.85
HMG20B-209ENST00000470356 TCTE3Q8IZS6 198 aa20.34■□□□□ 0.85
HMG20B-209ENST00000470356 LINC00269Q8N2A0 174 aa20.34■□□□□ 0.85
HMG20B-209ENST00000470356 DEFB104AQ8WTQ1 72 aa20.34■□□□□ 0.85
HMG20B-209ENST00000470356 J3QL48 77 aa20.32■□□□□ 0.84
HMG20B-209ENST00000470356 KRTAP26-1Q6PEX3 210 aa20.32■□□□□ 0.84
HMG20B-209ENST00000470356 LYZL1Q6UWQ5 148 aa20.32■□□□□ 0.84
HMG20B-209ENST00000470356 SLC51BQ86UW2 128 aa20.32■□□□□ 0.84
HMG20B-209ENST00000470356 TRGC1P0CF51 173 aa20.31■□□□□ 0.84
HMG20B-209ENST00000470356 RASL11AQ6T310 242 aa20.31■□□□□ 0.84
HMG20B-209ENST00000470356 CLPSL2Q6UWE3 100 aa20.31■□□□□ 0.84
HMG20B-209ENST00000470356 C9orf62Q8N4C0 152 aa20.31■□□□□ 0.84
HMG20B-209ENST00000470356 PRSS1P07477 247 aa20.3■□□□□ 0.84
HMG20B-209ENST00000470356 NKX2-5P52952 324 aaPredicted RBP20.3■□□□□ 0.84
HMG20B-209ENST00000470356 DGAT2L7PQ6IED9 249 aa20.3■□□□□ 0.84
HMG20B-209ENST00000470356 NTF3P20783 257 aa20.29■□□□□ 0.84
HMG20B-209ENST00000470356 WDR73Q6P4I2 378 aa20.29■□□□□ 0.84
HMG20B-209ENST00000470356 DPH3P1Q9H4G8 78 aa20.29■□□□□ 0.84
HMG20B-209ENST00000470356 TAGLN2P37802 199 aaKnown RBP20.28■□□□□ 0.84
HMG20B-209ENST00000470356 NUDT10Q8NFP7 164 aa20.28■□□□□ 0.84
HMG20B-209ENST00000470356 NUDT11Q96G61 164 aa20.28■□□□□ 0.84
HMG20B-209ENST00000470356 NIT2Q9NQR4 276 aa20.28■□□□□ 0.84
HMG20B-209ENST00000470356 KRTAP29-1A8MX34 341 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-209ENST00000470356 KRTAP10-4P60372 401 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-209ENST00000470356 REG3AQ06141 175 aa20.27■□□□□ 0.84
HMG20B-209ENST00000470356 CTRLP40313 264 aa20.26■□□□□ 0.83
HMG20B-209ENST00000470356 TMEM243Q9BU79 118 aa20.26■□□□□ 0.83
HMG20B-209ENST00000470356 A0A1B0GUV1 79 aa20.25■□□□□ 0.83
HMG20B-209ENST00000470356 C20orf203Q8NBC4 194 aa20.25■□□□□ 0.83
HMG20B-209ENST00000470356 PGLYRP4Q96LB8 373 aa20.25■□□□□ 0.83
HMG20B-209ENST00000470356 C9orf163Q8N9P6 203 aa20.24■□□□□ 0.83
HMG20B-209ENST00000470356 CNFNQ9BYD5 112 aa20.24■□□□□ 0.83
HMG20B-209ENST00000470356 TRAV8-4A0A0B4J246 113 aa20.22■□□□□ 0.83
HMG20B-209ENST00000470356 CLRN3Q8NCR9 226 aa20.22■□□□□ 0.83
HMG20B-209ENST00000470356 RPP21Q9H633 154 aaKnown RBP20.21■□□□□ 0.83
HMG20B-209ENST00000470356 IGLV4-60A0A075B6I1 120 aa20.2■□□□□ 0.82
HMG20B-209ENST00000470356 IGLV10-54A0A075B6I4 117 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms