RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 OR10A6Q8NH74 314 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 GNPDA2Q8TDQ7 276 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 CNBD2Q96M20 576 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 GPER1Q99527 375 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 PBDC1Q9BVG4 233 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 IMUPQ9GZP8 106 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 COMMD5Q9GZQ3 224 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 GABARAPL1Q9H0R8 117 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 RNASE7Q9H1E1 156 aaKnown RBP0.91□□□□□ -2.26
ITGA6-209ENST00000470259 MIXL1Q9H2W2 232 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 NOP10Q9NPE3 64 aaKnown RBP0.91□□□□□ -2.26
ITGA6-209ENST00000470259 UQCC1Q9NVA1 299 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 MPC1Q9Y5U8 109 aa0.91□□□□□ -2.26
ITGA6-209ENST00000470259 hCG_1818297A0A087WSY0 165 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 A6NED7 52 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 A8MT66 165 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 APOC4-APOC2K7ER74 178 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 LST1O00453 97 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 PFDN1O60925 122 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 ZNF737O75373 536 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 BANF1O75531 89 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 APOC2P02655 101 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 SMIM17P0DL12 118 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 PTHLHP12272 177 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 HTN1P15515 57 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 ATP6V0CP27449 155 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 CRABP2P29373 138 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 SRIP30626 198 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 NCALDP61601 193 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 GNG5P63218 68 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 CAV1Q03135 178 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 IAH1Q2TAA2 248 aaPredicted RBP0.9□□□□□ -2.27
ITGA6-209ENST00000470259 PSMG4Q5JS54 123 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 AKR1C8PQ5T2L2 129 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 Q6ZS49 121 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 C3orf22Q8N5N4 141 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 OR4K13Q8NH42 304 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 RNASE11Q8TAA1 199 aaKnown RBP0.9□□□□□ -2.27
ITGA6-209ENST00000470259 TSKUQ8WUA8 353 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 RAB2BQ8WUD1 216 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 ACOT12Q8WYK0 555 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 MAFIPQ8WZ33 124 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 LZICQ8WZA0 190 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 AQP3Q92482 292 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 BORCS5Q969J3 196 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 SPTSSAQ969W0 71 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 ROPN1LQ96C74 230 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 GPR146Q96CH1 333 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 NMNAT3Q96T66 252 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 CCDC90BQ9GZT6 254 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 RERGLQ9H628 205 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 CACYBPQ9HB71 228 aaKnown RBP0.9□□□□□ -2.27
ITGA6-209ENST00000470259 BCL2L10Q9HD36 194 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 LYRM2Q9NU23 88 aaPredicted RBP0.9□□□□□ -2.27
ITGA6-209ENST00000470259 SSR3Q9UNL2 185 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 PHLDA3Q9Y5J5 127 aa0.9□□□□□ -2.27
ITGA6-209ENST00000470259 TRGV2A0A075B6R0 118 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 IGHV3-21A0A0B4J1V1 117 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 IGHV3-43A0A0B4J1X8 118 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 C20orf202A1L168 122 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 IGKV2-29A2NJV5 120 aaPredicted RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 MAP1LC3B2A6NCE7 125 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 A8MUN3 132 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 A8MWP4 228 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 H3BMM0 161 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 H7C1C5 153 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 M0R135 149 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 NDUFA4O00483 81 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 UBE2L6O14933 153 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 ARPC5O15511 151 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 NDUFC2O95298 119 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 RBP1P09455 135 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 NBEAP1P0C6P0 100 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SCGB1A1P11684 91 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SPI1P17947 270 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SERPINB10P48595 397 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 TAS2R45P59539 299 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 LCN6P62502 163 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 HOXC5Q00444 222 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SURF2Q15527 256 aaPredicted RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SAMD13Q5VXD3 122 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 PACRGLQ8N7B6 248 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 OR10J5Q8NHC4 309 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 MRPL30Q8TCC3 161 aaKnown RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 HIST1H2BAQ96A08 127 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 C2orf50Q96LR7 162 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 ERMAPQ96PL5 475 aaPredicted RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 TTTY10Q9BZA0 68 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 MAP1LC3BQ9GZQ8 125 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 WDR61Q9GZS3 305 aaKnown RBP0.89□□□□□ -2.27
ITGA6-209ENST00000470259 TMEM222Q9H0R3 208 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 OR2D2Q9H210 308 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 TMEM138Q9NPI0 162 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 GSKIPQ9P0R6 139 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 NDUFA12Q9UI09 145 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 AK3Q9UIJ7 227 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 PRNDQ9UKY0 176 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 SNX12Q9UMY4 172 aa0.89□□□□□ -2.27
ITGA6-209ENST00000470259 CYSLTR1Q9Y271 337 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms