RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PTH2Q96A98 100 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 ZNF479Q96JC4 524 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 LINC00467Q9BRT7 94 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 SPXQ9BT56 116 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 BSNQ9UPA5 3926 aa5.9□□□□□ -1.47
SMC4-212ENST00000470240 PRRC2AP48634 2157 aaKnown RBP5.9□□□□□ -1.47
SMC4-212ENST00000470240 CRYBA4P53673 196 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 DEFB136Q30KP8 78 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 UFSP1Q6NVU6 142 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 MAPKAPK5-AS1Q8N8E1 139 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 PLEKHB2Q96CS7 222 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 LINC01587Q99440 93 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 TTTY13Q9BZ97 58 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 VCX2Q9H322 139 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 JPT2Q9H910 190 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 DOPEY1Q5JWR5 2465 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 CR1P17927 2039 aa5.89□□□□□ -1.47
SMC4-212ENST00000470240 J3QR89 54 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 C12orf74Q32Q52 190 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 CD300EQ496F6 205 aaPredicted RBP5.88□□□□□ -1.47
SMC4-212ENST00000470240 STHQ8IWL8 128 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 TMEM61Q8N0U2 210 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 C20orf203Q8NBC4 194 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 RNASE8Q8TDE3 154 aaKnown RBP5.88□□□□□ -1.47
SMC4-212ENST00000470240 MAP6D1Q9H9H5 199 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 SPANXA1Q9NS26 97 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 MUC4Q99102 2169 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 PKD1L2Q7Z442 2459 aa5.88□□□□□ -1.47
SMC4-212ENST00000470240 ASPMQ8IZT6 3477 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 IGLL5B9A064 214 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 TSHBP01222 138 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 CD28P10747 220 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 RPL39P62891 51 aaKnown RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 DEFB114Q30KQ6 69 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
SMC4-212ENST00000470240 DLX4Q92988 240 aaPredicted RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 BBC3Q96PG8 261 aaPredicted RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 SPANXB1Q9NS25 103 aaPredicted RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 MRPL16Q9NX20 251 aaKnown RBP5.87□□□□□ -1.47
SMC4-212ENST00000470240 ZZEF1O43149 2961 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 DNAJC9-AS1A6NH13 148 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 J3QQQ9 107 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 K7ERJ3 54 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 LEPROTO15243 131 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 KRTAP10-9P60411 292 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 COTL1Q14019 142 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 RRN3P1Q2M238 152 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 Q6ZSV7 163 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 PYGO1Q9Y3Y4 419 aa5.86□□□□□ -1.47
SMC4-212ENST00000470240 SPTAN1Q13813 2472 aaKnown RBP5.86□□□□□ -1.47
SMC4-212ENST00000470240 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 F8W1H4 67 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 RBX1P62877 108 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 PHLDA1Q8WV24 401 aaPredicted RBP5.85□□□□□ -1.47
SMC4-212ENST00000470240 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 TSSC4Q9Y5U2 329 aaPredicted RBP5.85□□□□□ -1.47
SMC4-212ENST00000470240 CHD8Q9HCK8 2581 aa5.85□□□□□ -1.47
SMC4-212ENST00000470240 CACNA1AO00555 2505 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 CCL24O00175 119 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 IGHV3-53P01767 116 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 EMP1P54849 157 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 RPL24P83731 157 aaKnown RBP5.84□□□□□ -1.47
SMC4-212ENST00000470240 MORN3Q6PF18 240 aaPredicted RBP5.84□□□□□ -1.47
SMC4-212ENST00000470240 C18orf65Q6ZTR6 163 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 ZNF418Q8TF45 676 aaPredicted RBP5.84□□□□□ -1.47
SMC4-212ENST00000470240 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
SMC4-212ENST00000470240 PIEZO1Q92508 2521 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 LRBAP50851 2863 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 IGLV4-3A0A075B6K6 122 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 A0A0J9YY99 117 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 A0A1W2PRX2 142 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 TMEM223A0PJW6 202 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1BA6NDE4 496 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1EA6NEQ0 496 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 RS1O15537 224 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1DP0C7P1 496 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1A1P0DJD3 496 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1CP0DJD4 496 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 RBMY1FQ15415 496 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 CFAP126Q5VTH2 177 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 C1QTNF4Q9BXJ3 329 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
SMC4-212ENST00000470240 YAE1D1Q9NRH1 226 aa5.83□□□□□ -1.48
SMC4-212ENST00000470240 KALRNO60229 2985 aa5.82□□□□□ -1.48
SMC4-212ENST00000470240 CSPG4Q6UVK1 2322 aa5.82□□□□□ -1.48
SMC4-212ENST00000470240 TRBV20-1A0A075B6N2 111 aa5.82□□□□□ -1.48
SMC4-212ENST00000470240 CIDEAO60543 219 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms