RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 Q6ZSN1 163 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 OR4C5Q8NGB2 326 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 ATOH7Q8N100 152 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 K7EMI3 77 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 VCYO14598 125 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 IGHV4-30-4P0DP06 118 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 EMP1P54849 157 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
SMC4-211ENST00000469858 KRTAP10-11P60412 298 aa13□□□□□ -0.33
SMC4-211ENST00000469858 DEFB135Q30KP9 77 aa13□□□□□ -0.33
SMC4-211ENST00000469858 PET117Q6UWS5 81 aa13□□□□□ -0.33
SMC4-211ENST00000469858 ZNF664Q8N3J9 261 aa13□□□□□ -0.33
SMC4-211ENST00000469858 KIR2DL4Q99706 377 aa13□□□□□ -0.33
SMC4-211ENST00000469858 PRO1933Q9H354 126 aa13□□□□□ -0.33
SMC4-211ENST00000469858 TRBV27A0A0K0K1C4 114 aa13□□□□□ -0.33
SMC4-211ENST00000469858 C20orf202A1L168 122 aa13□□□□□ -0.33
SMC4-211ENST00000469858 IGHV3-53P01767 116 aa13□□□□□ -0.33
SMC4-211ENST00000469858 ZFP2Q6ZN57 461 aa13□□□□□ -0.33
SMC4-211ENST00000469858 ZNF479Q96JC4 524 aa13□□□□□ -0.33
SMC4-211ENST00000469858 X6R8D5 127 aa13□□□□□ -0.33
SMC4-211ENST00000469858 COL6A5A8TX70 2615 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 GAGE12BA1L429 117 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 GAGE7O76087 117 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 GAGE12FP0CL80 117 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 GAGE12GP0CL81 117 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 GAGE12IP0CL82 117 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 VAMP8Q9BV40 100 aa12.99□□□□□ -0.33
SMC4-211ENST00000469858 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 PAM16Q9Y3D7 125 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 Q9UF83 564 aa12.98□□□□□ -0.33
SMC4-211ENST00000469858 PKIAP61925 76 aa12.97□□□□□ -0.33
SMC4-211ENST00000469858 TNFRSF18Q9Y5U5 241 aa12.97□□□□□ -0.33
SMC4-211ENST00000469858 TSTD3H0UI37 97 aa12.96□□□□□ -0.33
SMC4-211ENST00000469858 LINC01545Q5VT33 79 aa12.96□□□□□ -0.33
SMC4-211ENST00000469858 CMYA5Q8N3K9 4069 aa12.96□□□□□ -0.33
SMC4-211ENST00000469858 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.34
SMC4-211ENST00000469858 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.34
SMC4-211ENST00000469858 NEXN-AS1Q8NBZ9 246 aa12.96□□□□□ -0.34
SMC4-211ENST00000469858 TOMM6Q96B49 74 aa12.96□□□□□ -0.34
SMC4-211ENST00000469858 ATP5LO75964 103 aa12.95□□□□□ -0.34
SMC4-211ENST00000469858 G3V4G9 280 aa12.94□□□□□ -0.34
SMC4-211ENST00000469858 I3L3M4 83 aa12.94□□□□□ -0.34
SMC4-211ENST00000469858 MAJINQ3KP22 176 aa12.94□□□□□ -0.34
SMC4-211ENST00000469858 OR11H2Q8NH07 326 aa12.94□□□□□ -0.34
SMC4-211ENST00000469858 TSHBP01222 138 aa12.93□□□□□ -0.34
SMC4-211ENST00000469858 PRSS1P07477 247 aa12.93□□□□□ -0.34
SMC4-211ENST00000469858 SCGB3A1Q96QR1 104 aa12.93□□□□□ -0.34
SMC4-211ENST00000469858 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
SMC4-211ENST00000469858 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
SMC4-211ENST00000469858 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.92□□□□□ -0.34
SMC4-211ENST00000469858 K7EQD1 137 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
SMC4-211ENST00000469858 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
SMC4-211ENST00000469858 G0S2P27469 103 aa12.91□□□□□ -0.34
SMC4-211ENST00000469858 RHOHQ15669 191 aa12.91□□□□□ -0.34
SMC4-211ENST00000469858 DEFB4AO15263 64 aa12.9□□□□□ -0.34
SMC4-211ENST00000469858 RIPPLY3P57055 190 aa12.9□□□□□ -0.34
SMC4-211ENST00000469858 RPL39P62891 51 aaKnown RBP12.9□□□□□ -0.34
SMC4-211ENST00000469858 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
SMC4-211ENST00000469858 NBEAL2Q6ZNJ1 2754 aa12.9□□□□□ -0.34
SMC4-211ENST00000469858 Q6ZN92 141 aa12.9□□□□□ -0.34
SMC4-211ENST00000469858 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 ZNRF2Q8NHG8 242 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 PHLDA1Q8WV24 401 aaPredicted RBP12.89□□□□□ -0.35
SMC4-211ENST00000469858 RNF183Q96D59 192 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 TRGV4A0A0C4DH28 118 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 IGHV3-38A0A0C4DH36 116 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 ODF1Q14990 250 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 ERASQ7Z444 233 aa12.89□□□□□ -0.35
SMC4-211ENST00000469858 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
SMC4-211ENST00000469858 CIDEAO60543 219 aa12.88□□□□□ -0.35
SMC4-211ENST00000469858 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
SMC4-211ENST00000469858 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
SMC4-211ENST00000469858 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
SMC4-211ENST00000469858 TRBV7-3A0A075B6L6 115 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 LINC00587B1AMM8 73 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 RPL36AP83881 106 aaKnown RBP12.87□□□□□ -0.35
SMC4-211ENST00000469858 RPL36ALQ969Q0 106 aaKnown RBP12.87□□□□□ -0.35
SMC4-211ENST00000469858 MDFIQ99750 246 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 A8MZ25 164 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 MIFP14174 115 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 DDTP30046 118 aa12.87□□□□□ -0.35
SMC4-211ENST00000469858 Q8NAQ8 132 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms