RNA–Protein interactions for RNA: ENST00000468471.2

KCNMA1-217, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-217ENST00000468471 SMAD5-AS1Q9Y6J3 95 aa2.33□□□□□ -2.04
KCNMA1-217ENST00000468471 FRYLO94915 3013 aa2.33□□□□□ -2.04
KCNMA1-217ENST00000468471 ICE1Q9Y2F5 2266 aa2.33□□□□□ -2.04
KCNMA1-217ENST00000468471 MAP1BP46821 2468 aaKnown RBP2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 RP1L1Q8IWN7 2480 aaPredicted RBP2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 WDFY4Q6ZS81 3184 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 ABCA4P78363 2273 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 IGHV1-58A0A0C4DH39 117 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 TRBV10-1A0A0K0K1A3 114 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 CLPSL1A2RUU4 121 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 E7EQL1 145 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 H3BMM0 161 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 I3L3M4 83 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 ATOX1O00244 68 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LST1O00453 97 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 IGHG2P01859 326 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 CRYGDP07320 174 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 S100A4P26447 101 aaKnown RBP2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 ZNF80P51504 273 aaPredicted RBP2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LINC00315P59091 139 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 HERVK_113P63121 156 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 C15orf32Q32M92 178 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 FAM106AQ4KMX7 169 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LINC01620Q4KN68 170 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 C11orf71Q6IPW1 123 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 FAM159AQ6UWV7 190 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 VMO1Q7Z5L0 202 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 GTSCR1Q86UQ5 136 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LRRC75A-AS1Q8N1F1 130 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 DYNAPQ8N1N2 210 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 LINC01561Q8N1V8 128 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 SMIM20Q8N5G0 67 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 TMEM263Q8WUH6 116 aaKnown RBP2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 C9orf85Q96MD7 179 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 C17orf77Q96MU5 243 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 SIRPDQ9H106 197 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 PEMTQ9UBM1 199 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 MOB4Q9Y3A3 225 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 UFC1Q9Y3C8 167 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 HILPDAQ9Y5L2 63 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 CACNA1HO95180 2353 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 SVILO95425 2214 aa2.32□□□□□ -2.04
KCNMA1-217ENST00000468471 ZNF292O60281 2723 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 IGKV2-40A0A087WW87 121 aaPredicted RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 TRAV8-2A0A0B4J237 113 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 LOC107984156A0A0G2JMH3 177 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 SPAARA0A1B0GVQ0 90 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 H0YGX0 51 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 NDUFA1O15239 70 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 ZZEF1O43149 2961 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 TCL1BO95988 128 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 IGKV2D-40P01614 121 aaPredicted RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 IGKV3-20P01619 116 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 CRYGAP11844 174 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 RNASE3P12724 160 aaKnown RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 NBL1P41271 181 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 EFNA4P52798 201 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 XGP55808 180 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 CMC4P56277 68 aaPredicted RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 SNRPD3P62318 126 aaKnown RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 FAM27E3Q08E93 113 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 DIAPH2-AS1Q14236 149 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 MIAQ16674 131 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 ANXA2RQ3ZCQ2 193 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 TMEM219Q86XT9 240 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 ARL17AQ8IVW1 177 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 TMEM61Q8N0U2 210 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 LINC00526Q96FQ7 95 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 C18orf15Q96N68 181 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 PRRC2AP48634 2157 aaKnown RBP2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 FREM2Q5SZK8 3169 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 TTC28Q96AY4 2481 aa2.31□□□□□ -2.04
KCNMA1-217ENST00000468471 NACAE9PAV3 2078 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 ACACAQ13085 2346 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 DMDP11532 3685 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 TRAV13-2A0A0B4J235 113 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 TRAV8-4A0A0B4J246 113 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 TRAV41A0A0B4J266 112 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 IGLV5-39A0A0G2JS06 123 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 A0A1B0GW54 56 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 M0QY20 66 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 COX7A2LO14548 114 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 PDE6GP18545 87 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 PPIFP30405 207 aaKnown RBP2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 DSCR9P59020 149 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 TMEM258P61165 79 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 HIST2H2BCQ6DN03 193 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 HIST2H2BDQ6DRA6 164 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 LYPD2Q6UXB3 125 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 SH2D6Q7Z4S9 175 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 C5orf56Q8N8D9 126 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 MAPKAPK5-AS1Q8N8E1 139 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 C11orf44Q8N8P7 122 aa2.3□□□□□ -2.04
KCNMA1-217ENST00000468471 DEFB124Q8NES8 71 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms