RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 DNAJC30Q96LL9 226 aa13.62□□□□□ -0.23
NPHP4-206ENST00000468253 EPPK1P58107 5090 aaKnown RBP13.61□□□□□ -0.23
NPHP4-206ENST00000468253 ADIRFQ15847 76 aa13.61□□□□□ -0.23
NPHP4-206ENST00000468253 SMIM15Q7Z3B0 74 aa13.61□□□□□ -0.23
NPHP4-206ENST00000468253 C10orf126Q8N4M7 172 aa13.61□□□□□ -0.23
NPHP4-206ENST00000468253 PGLYRP4Q96LB8 373 aa13.61□□□□□ -0.23
NPHP4-206ENST00000468253 PRSS29PA6NIE9 313 aa13.6□□□□□ -0.23
NPHP4-206ENST00000468253 HIGD1CA8MV81 97 aa13.6□□□□□ -0.23
NPHP4-206ENST00000468253 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-206ENST00000468253 FRZBQ92765 325 aa13.59□□□□□ -0.23
NPHP4-206ENST00000468253 BORCS7Q96B45 105 aa13.59□□□□□ -0.23
NPHP4-206ENST00000468253 A0A1B0GUT8 65 aa13.58□□□□□ -0.24
NPHP4-206ENST00000468253 TMEM97Q5BJF2 176 aa13.58□□□□□ -0.24
NPHP4-206ENST00000468253 SUMO4Q6EEV6 95 aa13.58□□□□□ -0.24
NPHP4-206ENST00000468253 DAZ4Q86SG3 579 aaKnown RBP13.58□□□□□ -0.24
NPHP4-206ENST00000468253 NFE4Q86UQ8 179 aa13.58□□□□□ -0.24
NPHP4-206ENST00000468253 DAZ3Q9NR90 486 aaKnown RBP13.58□□□□□ -0.24
NPHP4-206ENST00000468253 MGPP08493 103 aa13.57□□□□□ -0.24
NPHP4-206ENST00000468253 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
NPHP4-206ENST00000468253 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
NPHP4-206ENST00000468253 TNFRSF18Q9Y5U5 241 aa13.57□□□□□ -0.24
NPHP4-206ENST00000468253 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
NPHP4-206ENST00000468253 NIT2Q9NQR4 276 aa13.56□□□□□ -0.24
NPHP4-206ENST00000468253 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
NPHP4-206ENST00000468253 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
NPHP4-206ENST00000468253 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-206ENST00000468253 RIGQ13278 110 aa13.55□□□□□ -0.24
NPHP4-206ENST00000468253 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
NPHP4-206ENST00000468253 A0A1B0GVY2 172 aa13.54□□□□□ -0.24
NPHP4-206ENST00000468253 IBA57-AS1B1ANH7 110 aa13.54□□□□□ -0.24
NPHP4-206ENST00000468253 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
NPHP4-206ENST00000468253 HECTD4Q9Y4D8 3996 aa13.54□□□□□ -0.24
NPHP4-206ENST00000468253 PPP1R2P9O14990 202 aa13.53□□□□□ -0.24
NPHP4-206ENST00000468253 CHCHD7Q9BUK0 85 aa13.53□□□□□ -0.24
NPHP4-206ENST00000468253 Q6ZRN7 208 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-206ENST00000468253 GATD1Q8NB37 220 aa13.52□□□□□ -0.25
NPHP4-206ENST00000468253 TNP2Q05952 138 aa13.51□□□□□ -0.25
NPHP4-206ENST00000468253 NIT1Q86X76 327 aa13.51□□□□□ -0.25
NPHP4-206ENST00000468253 BIRC6Q9NR09 4857 aa13.5□□□□□ -0.25
NPHP4-206ENST00000468253 A0A1B0GW15 77 aa13.5□□□□□ -0.25
NPHP4-206ENST00000468253 PKIAP61925 76 aa13.5□□□□□ -0.25
NPHP4-206ENST00000468253 LAGE3Q14657 143 aa13.5□□□□□ -0.25
NPHP4-206ENST00000468253 TMEM218A2RU14 115 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 IGHV3-30P01768 117 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 IGHV3-30-3P0DP02 117 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 IGHV3-30-5P0DP03 117 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 KCNIP4Q6PIL6 250 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 ANAPC16Q96DE5 110 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 URGCP-MRPS24S4R325 110 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 PKD1P98161 4303 aa13.49□□□□□ -0.25
NPHP4-206ENST00000468253 MT-ND4LP03901 98 aa13.48□□□□□ -0.25
NPHP4-206ENST00000468253 ELOBQ15370 118 aa13.48□□□□□ -0.25
NPHP4-206ENST00000468253 NTM-AS1Q6ZSK4 140 aa13.48□□□□□ -0.25
NPHP4-206ENST00000468253 A0A087WX48 190 aa13.47□□□□□ -0.25
NPHP4-206ENST00000468253 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
NPHP4-206ENST00000468253 RAB4AP20338 218 aa13.47□□□□□ -0.25
NPHP4-206ENST00000468253 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
NPHP4-206ENST00000468253 TRBV25-1A0A075B6N4 114 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 TRAV8-3A0A0A6YYJ7 113 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 MRAP2Q96G30 205 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
NPHP4-206ENST00000468253 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
NPHP4-206ENST00000468253 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
NPHP4-206ENST00000468253 S100A8P05109 93 aa13.45□□□□□ -0.26
NPHP4-206ENST00000468253 DNAH11Q96DT5 4516 aa13.45□□□□□ -0.26
NPHP4-206ENST00000468253 CHCHD5Q9BSY4 110 aa13.44□□□□□ -0.26
NPHP4-206ENST00000468253 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
NPHP4-206ENST00000468253 F8W036 122 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 PPP1R17O96001 155 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 FAM104BQ5XKR9 115 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 COMMD7Q86VX2 200 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 Q8N3U1 123 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
NPHP4-206ENST00000468253 NCR2O95944 276 aa13.42□□□□□ -0.26
NPHP4-206ENST00000468253 COTL1Q14019 142 aa13.42□□□□□ -0.26
NPHP4-206ENST00000468253 ATP5L2Q7Z4Y8 100 aa13.42□□□□□ -0.26
NPHP4-206ENST00000468253 AMN1Q8IY45 258 aa13.42□□□□□ -0.26
NPHP4-206ENST00000468253 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
NPHP4-206ENST00000468253 A0A1B0GXF2 115 aa13.41□□□□□ -0.26
NPHP4-206ENST00000468253 CAMPP49913 170 aa13.41□□□□□ -0.26
NPHP4-206ENST00000468253 COX11Q9Y6N1 276 aa13.41□□□□□ -0.26
NPHP4-206ENST00000468253 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
NPHP4-206ENST00000468253 SDHAF1A6NFY7 115 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 EREGO14944 169 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 ADCYAP1P18509 176 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 HBBP68871 147 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 IMMP2LQ96T52 175 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 ST20Q9HBF5 79 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
NPHP4-206ENST00000468253 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
NPHP4-206ENST00000468253 I3L3M4 83 aa13.39□□□□□ -0.27
NPHP4-206ENST00000468253 POLR2KP53803 58 aaKnown RBP13.39□□□□□ -0.27
NPHP4-206ENST00000468253 Q0VG73 95 aa13.39□□□□□ -0.27
NPHP4-206ENST00000468253 C10orf91Q5T1B1 145 aa13.39□□□□□ -0.27
NPHP4-206ENST00000468253 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms