RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 URGCP-MRPS24S4R325 110 aa12.09□□□□□ -0.47
CGREF1-208ENST00000467539 PCLOQ9Y6V0 5065 aa12.09□□□□□ -0.47
CGREF1-208ENST00000467539 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
CGREF1-208ENST00000467539 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
CGREF1-208ENST00000467539 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
CGREF1-208ENST00000467539 TMEM250H0YL14 139 aa12.07□□□□□ -0.48
CGREF1-208ENST00000467539 ELOBQ15370 118 aa12.07□□□□□ -0.48
CGREF1-208ENST00000467539 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
CGREF1-208ENST00000467539 Q8N1X5 172 aa12.07□□□□□ -0.48
CGREF1-208ENST00000467539 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
CGREF1-208ENST00000467539 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
CGREF1-208ENST00000467539 A0A087WX48 190 aa12.06□□□□□ -0.48
CGREF1-208ENST00000467539 GCSHP23434 173 aa12.06□□□□□ -0.48
CGREF1-208ENST00000467539 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
CGREF1-208ENST00000467539 Q8N814 137 aa12.06□□□□□ -0.48
CGREF1-208ENST00000467539 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 K7EN84 100 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 M0QY20 66 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 NTF3P20783 257 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 KLK12Q9UKR0 248 aa12.05□□□□□ -0.48
CGREF1-208ENST00000467539 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
CGREF1-208ENST00000467539 NKX2-5P52952 324 aaPredicted RBP12.04□□□□□ -0.48
CGREF1-208ENST00000467539 XGP55808 180 aa12.04□□□□□ -0.48
CGREF1-208ENST00000467539 RMI2Q96E14 147 aa12.04□□□□□ -0.48
CGREF1-208ENST00000467539 RNASE7Q9H1E1 156 aaKnown RBP12.04□□□□□ -0.48
CGREF1-208ENST00000467539 IGLV5-52A0A0A0MRZ9 124 aa12.03□□□□□ -0.48
CGREF1-208ENST00000467539 H7C1H1 209 aa12.03□□□□□ -0.48
CGREF1-208ENST00000467539 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
CGREF1-208ENST00000467539 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
CGREF1-208ENST00000467539 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
CGREF1-208ENST00000467539 CNFNQ9BYD5 112 aa12.03□□□□□ -0.48
CGREF1-208ENST00000467539 RPP21Q9H633 154 aaKnown RBP12.03□□□□□ -0.48
CGREF1-208ENST00000467539 CTRLP40313 264 aa12.02□□□□□ -0.49
CGREF1-208ENST00000467539 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
CGREF1-208ENST00000467539 MGPP08493 103 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 PKIAP61925 76 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 Q0VG73 95 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 DPH3P1Q9H4G8 78 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 ABCA13Q86UQ4 5058 aa12.01□□□□□ -0.49
CGREF1-208ENST00000467539 WFDC2Q14508 124 aa12□□□□□ -0.49
CGREF1-208ENST00000467539 RASL11AQ6T310 242 aa12□□□□□ -0.49
CGREF1-208ENST00000467539 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
CGREF1-208ENST00000467539 CHCHD5Q9BSY4 110 aa12□□□□□ -0.49
CGREF1-208ENST00000467539 EIF5A2Q9GZV4 153 aaKnown RBP12□□□□□ -0.49
CGREF1-208ENST00000467539 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 TWIST1Q15672 202 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 FAM210AQ96ND0 272 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
CGREF1-208ENST00000467539 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
CGREF1-208ENST00000467539 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
CGREF1-208ENST00000467539 MPV17L2Q567V2 206 aa11.98□□□□□ -0.49
CGREF1-208ENST00000467539 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
CGREF1-208ENST00000467539 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
CGREF1-208ENST00000467539 A8MWL6 223 aa11.97□□□□□ -0.49
CGREF1-208ENST00000467539 CEBPGP53567 150 aa11.97□□□□□ -0.49
CGREF1-208ENST00000467539 FOXA3P55318 350 aaPredicted RBP11.97□□□□□ -0.49
CGREF1-208ENST00000467539 Q8N976 141 aa11.97□□□□□ -0.49
CGREF1-208ENST00000467539 LECT2O14960 151 aa11.96□□□□□ -0.49
CGREF1-208ENST00000467539 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
CGREF1-208ENST00000467539 C15orf54Q8N8G6 183 aa11.96□□□□□ -0.49
CGREF1-208ENST00000467539 FRZBQ92765 325 aa11.96□□□□□ -0.49
CGREF1-208ENST00000467539 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
CGREF1-208ENST00000467539 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
CGREF1-208ENST00000467539 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
CGREF1-208ENST00000467539 CT83Q5H943 113 aa11.95□□□□□ -0.5
CGREF1-208ENST00000467539 SMIM7Q9BQ49 75 aa11.95□□□□□ -0.5
CGREF1-208ENST00000467539 RBX1P62877 108 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 GAGE6Q13070 117 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 C1orf43Q9BWL3 253 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 PRR34Q9NV39 138 aa11.94□□□□□ -0.5
CGREF1-208ENST00000467539 ZNF727A8MUV8 499 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 CRPP02741 224 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 MIAQ16674 131 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 SMIM15Q7Z3B0 74 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
CGREF1-208ENST00000467539 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
CGREF1-208ENST00000467539 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
CGREF1-208ENST00000467539 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
CGREF1-208ENST00000467539 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.91□□□□□ -0.5
CGREF1-208ENST00000467539 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
CGREF1-208ENST00000467539 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
CGREF1-208ENST00000467539 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
CGREF1-208ENST00000467539 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
CGREF1-208ENST00000467539 FAM231BA6NCW3 169 aa11.9□□□□□ -0.5
CGREF1-208ENST00000467539 FAM74A3Q4VXF1 159 aa11.9□□□□□ -0.5
CGREF1-208ENST00000467539 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
CGREF1-208ENST00000467539 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
CGREF1-208ENST00000467539 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
CGREF1-208ENST00000467539 COTL1Q14019 142 aa11.89□□□□□ -0.51
CGREF1-208ENST00000467539 TMEM241Q24JQ0 296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms