RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 RBM3P98179 157 aaKnown RBP0.9□□□□□ -2.27
SMC4-208ENST00000467468 INSL4Q14641 139 aa0.9□□□□□ -2.27
SMC4-208ENST00000467468 LINC00312Q9Y6C7 94 aa0.9□□□□□ -2.27
SMC4-208ENST00000467468 MAP2P11137 1827 aaKnown RBP0.89□□□□□ -2.27
SMC4-208ENST00000467468 MYH7P12883 1935 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 ESPL1Q14674 2120 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 LOC285556D6RIA3 1793 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 TRAV13-2A0A0B4J235 113 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 MIF4GDA9UHW6 222 aaKnown RBP0.89□□□□□ -2.27
SMC4-208ENST00000467468 TNFP01375 233 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 IFNGP01579 166 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 PPP3R2Q96LZ3 170 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 CASKIN1Q8WXD9 1431 aa0.89□□□□□ -2.27
SMC4-208ENST00000467468 PEG3Q9GZU2 1588 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 F2Z2F3 143 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 F6UZH7 168 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 CORTO00230 105 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 CATR1Q13166 79 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 FAM103A1Q9BTL3 118 aaKnown RBP0.88□□□□□ -2.27
SMC4-208ENST00000467468 BPESC1Q9GZL8 116 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 ABCA4P78363 2273 aa0.88□□□□□ -2.27
SMC4-208ENST00000467468 GVQW2A0A096LPI5 108 aaPredicted RBP0.87□□□□□ -2.27
SMC4-208ENST00000467468 WFDC6Q9BQY6 131 aa0.87□□□□□ -2.27
SMC4-208ENST00000467468 GNG8Q9UK08 70 aa0.87□□□□□ -2.27
SMC4-208ENST00000467468 RBBP6Q7Z6E9 1792 aaKnown RBP0.87□□□□□ -2.27
SMC4-208ENST00000467468 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
SMC4-208ENST00000467468 QRICH2Q9H0J4 1663 aa0.87□□□□□ -2.27
SMC4-208ENST00000467468 TANC1Q9C0D5 1861 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 LRRC37A3O60309 1634 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 KTN1Q86UP2 1357 aaKnown RBP0.86□□□□□ -2.27
SMC4-208ENST00000467468 CDK13Q14004 1512 aaKnown RBP0.86□□□□□ -2.27
SMC4-208ENST00000467468 TPPP2P59282 170 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 MRPL54Q6P161 138 aaKnown RBP0.86□□□□□ -2.27
SMC4-208ENST00000467468 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 C8orf59Q8N0T1 100 aaPredicted RBP0.86□□□□□ -2.27
SMC4-208ENST00000467468 SMIM11BQ8TCY0 68 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 IER3IP1Q9Y5U9 82 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 EIF4G3O43432 1585 aaKnown RBP0.86□□□□□ -2.27
SMC4-208ENST00000467468 PXDNQ92626 1479 aa0.86□□□□□ -2.27
SMC4-208ENST00000467468 PARP14Q460N5 1801 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 MYH9P35579 1960 aaKnown RBP0.85□□□□□ -2.27
SMC4-208ENST00000467468 TRGV1A0A0A0MS02 117 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 SNAPC5O75971 98 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 ACYP2P14621 99 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 GNG4P50150 75 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 SPINK7P58062 85 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 AQP10Q96PS8 301 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 SPANXDQ9BXN6 97 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 SCP2D1Q9UJQ7 156 aa0.85□□□□□ -2.27
SMC4-208ENST00000467468 NWD2Q9ULI1 1742 aa0.84□□□□□ -2.27
SMC4-208ENST00000467468 OOSP1A8MZH6 123 aa0.84□□□□□ -2.27
SMC4-208ENST00000467468 MRPS10P82664 201 aaKnown RBP0.84□□□□□ -2.27
SMC4-208ENST00000467468 VMO1Q7Z5L0 202 aa0.84□□□□□ -2.27
SMC4-208ENST00000467468 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
SMC4-208ENST00000467468 MYOM2P54296 1465 aa0.84□□□□□ -2.28
SMC4-208ENST00000467468 ZDBF2Q9HCK1 2354 aa0.84□□□□□ -2.28
SMC4-208ENST00000467468 TNS1Q9HBL0 1735 aaKnown RBP0.84□□□□□ -2.28
SMC4-208ENST00000467468 CPSF1Q10570 1443 aaKnown RBP0.83□□□□□ -2.28
SMC4-208ENST00000467468 C10orf128Q5T292 105 aa0.83□□□□□ -2.28
SMC4-208ENST00000467468 C9orf153Q5TBE3 101 aa0.83□□□□□ -2.28
SMC4-208ENST00000467468 C5orf38Q86SI9 138 aa0.83□□□□□ -2.28
SMC4-208ENST00000467468 ASH1LQ9NR48 2969 aaKnown RBP0.83□□□□□ -2.28
SMC4-208ENST00000467468 ARAP2Q8WZ64 1704 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 TMEM14DPA8MWL7 114 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 SSSCA1O60232 199 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 PPP3R1P63098 170 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 WHAMMP3Q1A5X7 153 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 Q5VV11 94 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 CYP4F30PQ9H0H9 118 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 FAM135AQ9P2D6 1515 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 SSC5DA1L4H1 1573 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 ARFGEF1Q9Y6D6 1849 aa0.82□□□□□ -2.28
SMC4-208ENST00000467468 PPIP5K1Q6PFW1 1433 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 SIPA1L3O60292 1781 aaPredicted RBP0.81□□□□□ -2.28
SMC4-208ENST00000467468 S100A1P23297 94 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 Q6ZRX8 168 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 COMMD6Q7Z4G1 85 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 TTC9CQ8N5M4 171 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 KIAA0100Q14667 2235 aaKnown RBP0.81□□□□□ -2.28
SMC4-208ENST00000467468 CUL7Q14999 1698 aa0.81□□□□□ -2.28
SMC4-208ENST00000467468 CCL18P55774 89 aa0.8□□□□□ -2.28
SMC4-208ENST00000467468 BAGE3Q86Y29 109 aa0.8□□□□□ -2.28
SMC4-208ENST00000467468 ZMYM4Q5VZL5 1548 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 FBN2P35556 2912 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
SMC4-208ENST00000467468 RIMS1Q86UR5 1692 aaKnown RBP0.79□□□□□ -2.28
SMC4-208ENST00000467468 TRAV1-2A0A0B4J238 106 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 PPP1R17O96001 155 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 SMIM6P0DI80 62 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 S100PP25815 95 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 PLAC8Q9NZF1 115 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 LENEPQ9Y5L5 61 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 NOTCH1P46531 2555 aa0.79□□□□□ -2.28
SMC4-208ENST00000467468 PATJQ8NI35 1801 aa0.78□□□□□ -2.28
SMC4-208ENST00000467468 CGREF1Q99674 301 aa0.78□□□□□ -2.28
SMC4-208ENST00000467468 R4GMQ9 66 aa0.78□□□□□ -2.28
SMC4-208ENST00000467468 KNTC1P50748 2209 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms