RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RASL11AQ6T310 242 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM91Q6ZNR0 172 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 Q6ZRP5 223 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 TCTE3Q8IZS6 198 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 C10orf126Q8N4M7 172 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 SAMD12Q8N8I0 201 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 PGLYRP4Q96LB8 373 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 LITAFQ99732 161 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 ANAPC13Q9BS18 74 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 ATG5Q9H1Y0 275 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 Q9H521 79 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF331Q9NQX6 463 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 LY96Q9Y6Y9 160 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 A0A096LPF7 62 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 TRAV1-2A0A0B4J238 106 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 TRAV5A0A0B4J249 113 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 A0A0B4J2A0 478 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 LRCOL1A6NCL2 159 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM235A6NFC5 223 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 C1orf196B1AJZ1 125 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 H0Y9J4 135 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 NDUFS5O43920 106 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 IL4P05112 153 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 RNASE2P10153 161 aaKnown RBP3.6□□□□□ -1.83
PTCD3-207ENST00000467273 OR10J1P30954 320 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 FXYD4P59646 89 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 FABP5Q01469 135 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 HRCT1Q6UXD1 115 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 Q8N814 137 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 NUP35Q8NFH5 326 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 LINC00467Q9BRT7 94 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 SAMD10Q9BYL1 202 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 JPT2Q9H910 190 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
PTCD3-207ENST00000467273 OR5AC2Q9NZP5 309 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 MTFP1Q9UDX5 166 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 NAT8Q9UHE5 227 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 SHPKQ9UHJ6 478 aa3.6□□□□□ -1.83
PTCD3-207ENST00000467273 LSM2Q9Y333 95 aaKnown RBP3.6□□□□□ -1.83
PTCD3-207ENST00000467273 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 A0A0J9YY99 117 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 H3BP45 60 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 PSCAO43653 123 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 NTF3P20783 257 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
PTCD3-207ENST00000467273 DEFB1P60022 68 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 SUPT4H1P63272 117 aaKnown RBP3.59□□□□□ -1.83
PTCD3-207ENST00000467273 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
PTCD3-207ENST00000467273 SPINK13Q1W4C9 94 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM241Q24JQ0 296 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 CENPWQ5EE01 88 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 PYY3Q5JQD4 70 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 OR11H7Q8NGC8 314 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 RBPMSQ93062 196 aaKnown RBP3.59□□□□□ -1.83
PTCD3-207ENST00000467273 LINC01587Q99440 93 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 SLC25A31Q9H0C2 315 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 MED9Q9NWA0 146 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 MRPL36Q9P0J6 103 aaKnown RBP3.59□□□□□ -1.83
PTCD3-207ENST00000467273 CACNG5Q9UF02 275 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 ICOSQ9Y6W8 199 aa3.59□□□□□ -1.83
PTCD3-207ENST00000467273 A0A0G2JRQ6 117 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 PGPA6NDG6 321 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 H7BYZ3 331 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 J3QR89 54 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 K7EPK0 472 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 BCL2L11O43521 198 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 CXorf1O96002 111 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 IGLV2-8P01709 118 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 CT45A10P0DMU9 189 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 ATP6V0CP27449 155 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 S100A2P29034 98 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 SLC38A11Q08AI6 406 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 Q6ZRU5 148 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 C11orf72Q8NBR9 251 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 CHCHD10Q8WYQ3 142 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-207ENST00000467273 VSIG2Q96IQ7 327 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 SLC35E1Q96K37 410 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 CHAC1Q9BUX1 264 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 GTSF1LQ9H1H1 148 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 KCNIP2Q9NS61 270 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 RBM12B-AS1Q9P1G2 102 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 LAMTOR3Q9UHA4 124 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
PTCD3-207ENST00000467273 TRAV4A0A0B4J268 109 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 MPC2O95563 127 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 PRM2P04554 102 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 GPX1P07203 203 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 AKAIN1P0CW23 69 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-207ENST00000467273 ASIPP42127 132 aa3.57□□□□□ -1.84
PTCD3-207ENST00000467273 PSMB2P49721 201 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms