RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TGFBR1P36897 503 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 BTN1A1Q13410 526 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 ZNF846Q147U1 533 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 LINC01556Q5JQF7 62 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 ZNF680Q8NEM1 530 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 OR5H6Q8NGV6 325 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 ATP6V0E2Q8NHE4 81 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 S100A16Q96FQ6 103 aaKnown RBP1.5□□□□□ -2.17
XRN1-206ENST00000467077 DPH3Q96FX2 82 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 TRGV9Q99603 122 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 BCL7BQ9BQE9 202 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 TMEM147Q9BVK8 224 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 NDUFB11Q9NX14 153 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 PAIP2BQ9ULR5 123 aaKnown RBP1.5□□□□□ -2.17
XRN1-206ENST00000467077 TPRKBQ9Y3C4 175 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 MUC2Q02817 5179 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 IGKV1OR2-108A0A075B7D4 117 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TRAV8-3A0A0A6YYJ7 113 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TRAV8-1A0A0A6YYK1 113 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 A0A1W2PPV4 95 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 C7orf71A4D174 169 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 GGTLC3B5MD39 225 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TNFAIP8O95379 198 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 MBP02144 154 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 SLC25A5P05141 298 aaKnown RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 OR5G3P0C626 314 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 RPL7P18124 248 aaKnown RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 TCL1AP56279 114 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 AKR1C1Q04828 323 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 ATP6V1FQ16864 119 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 NMSQ5H8A3 153 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TMEM136Q6ZRR5 245 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 IQCF2Q8IXL9 164 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 PACRGLQ8N7B6 248 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 DTD1Q8TEA8 209 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 ZNF431Q8TF32 576 aaPredicted RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 TMEM222Q9H0R3 208 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 C8orf4Q9NR00 106 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TXNL4BQ9NX01 149 aaKnown RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 COPZ2Q9P299 210 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 SSR3Q9UNL2 185 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 CARHSP1Q9Y2V2 147 aaKnown RBP1.49□□□□□ -2.17
XRN1-206ENST00000467077 U3KQ87 197 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 LPAP08519 4548 aa1.49□□□□□ -2.17
XRN1-206ENST00000467077 TNXBP22105 4242 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 LINC00854A0A1B0GVQ3 168 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 FABP12A6NFH5 140 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 H3BRN7 92 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 HYPMO75409 117 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 CDS2O95674 445 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 IGLV7-43P04211 117 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 IL5P05113 134 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 GPX1P07203 203 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 PFN1P07737 140 aaKnown RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 SULT1A3P0DMM9 295 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SULT1A4P0DMN0 295 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SDC2P34741 201 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 FLI1Q01543 452 aaPredicted RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 SCGB2B2Q4G0G5 96 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 UBE2NLQ5JXB2 153 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 IBA57Q5T440 356 aaKnown RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 LCN15Q6UWW0 184 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 DAZ4Q86SG3 579 aaKnown RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 S100A7AQ86SG5 101 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SNX29P2Q8IUI4 249 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SELENOHQ8IZQ5 122 aaKnown RBP1.48□□□□□ -2.17
XRN1-206ENST00000467077 LINC00469Q8N7U9 141 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 C1orf64Q8NEQ6 169 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 OR10P1Q8NGE3 313 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 OR13C8Q8NGS7 320 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 LHFPL5Q8TAF8 219 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 ZFAND1Q8TCF1 268 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 DNAJC30Q96LL9 226 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 ODF3Q96PU9 254 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SEC22CQ9BRL7 303 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SLC50A1Q9BRV3 221 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SHANK2-AS3Q9BTD1 123 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 ARL6Q9H0F7 186 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 DUSP21Q9H596 190 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 SND1-IT1Q9HBX3 110 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 CACFD1Q9UGQ2 172 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 ANAPC10Q9UM13 185 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 HIGD1AQ9Y241 93 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 URGCP-MRPS24S4R325 110 aa1.48□□□□□ -2.17
XRN1-206ENST00000467077 TRAV4A0A0B4J268 109 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 LOC100506127A0A0U1RQW1 187 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 SMIM31A0A1B0GVY4 71 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 SLC17A3O00476 420 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 NDUFS5O43920 106 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 OR4E1P0C645 316 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 STAG3L2P0CL84 134 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 IAPPP10997 89 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 AKR1C4P17516 323 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 CXCL2P19875 107 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 RAB31Q13636 194 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms