RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
SRSF4-202ENST00000466448 PRR27Q6MZM9 219 aa12.13□□□□□ -0.47
SRSF4-202ENST00000466448 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
SRSF4-202ENST00000466448 FHITP49789 147 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 ZNF56Q15929 161 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 OR10AG1Q8NH19 301 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 MBD3L1Q8WWY6 194 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
SRSF4-202ENST00000466448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-202ENST00000466448 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
SRSF4-202ENST00000466448 MIAQ16674 131 aa12.11□□□□□ -0.47
SRSF4-202ENST00000466448 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
SRSF4-202ENST00000466448 C9orf163Q8N9P6 203 aa12.11□□□□□ -0.47
SRSF4-202ENST00000466448 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
SRSF4-202ENST00000466448 PANO1I0J062 215 aa12.1□□□□□ -0.47
SRSF4-202ENST00000466448 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 RAB5CP51148 216 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 RPL19P84098 196 aaKnown RBP12.09□□□□□ -0.47
SRSF4-202ENST00000466448 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 PRR34Q9NV39 138 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 PKHD1L1Q86WI1 4243 aa12.09□□□□□ -0.47
SRSF4-202ENST00000466448 AKR1C3P42330 323 aa12.08□□□□□ -0.48
SRSF4-202ENST00000466448 PKIAP61925 76 aa12.08□□□□□ -0.48
SRSF4-202ENST00000466448 KRTAP26-1Q6PEX3 210 aa12.08□□□□□ -0.48
SRSF4-202ENST00000466448 CLPSL2Q6UWE3 100 aa12.08□□□□□ -0.48
SRSF4-202ENST00000466448 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
SRSF4-202ENST00000466448 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-202ENST00000466448 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 MT1HL1P0DM35 61 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 RBX1P62877 108 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
SRSF4-202ENST00000466448 PAGE4O60829 102 aa12.06□□□□□ -0.48
SRSF4-202ENST00000466448 VAX2Q9UIW0 290 aa12.06□□□□□ -0.48
SRSF4-202ENST00000466448 F5H697 171 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 SNAI2O43623 268 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 CXCL1P09341 107 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 GAGE6Q13070 117 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
SRSF4-202ENST00000466448 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
SRSF4-202ENST00000466448 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
SRSF4-202ENST00000466448 A0A1B0GV50 99 aa12.04□□□□□ -0.48
SRSF4-202ENST00000466448 TMEM97Q5BJF2 176 aa12.04□□□□□ -0.48
SRSF4-202ENST00000466448 SPANXN1Q5VSR9 72 aa12.04□□□□□ -0.48
SRSF4-202ENST00000466448 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
SRSF4-202ENST00000466448 OR5AL1P0C617 328 aa12.03□□□□□ -0.48
SRSF4-202ENST00000466448 SULT1A2P50226 295 aa12.03□□□□□ -0.48
SRSF4-202ENST00000466448 SSTP61278 116 aa12.03□□□□□ -0.48
SRSF4-202ENST00000466448 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
SRSF4-202ENST00000466448 KIF25-AS1Q9Y6Z4 181 aa12.03□□□□□ -0.48
SRSF4-202ENST00000466448 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
SRSF4-202ENST00000466448 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
SRSF4-202ENST00000466448 C9orf62Q8N4C0 152 aa12.02□□□□□ -0.49
SRSF4-202ENST00000466448 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
SRSF4-202ENST00000466448 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
SRSF4-202ENST00000466448 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
SRSF4-202ENST00000466448 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
SRSF4-202ENST00000466448 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
SRSF4-202ENST00000466448 REG3AQ06141 175 aa12.01□□□□□ -0.49
SRSF4-202ENST00000466448 IQCJQ1A5X6 159 aa12.01□□□□□ -0.49
SRSF4-202ENST00000466448 Q6ZRU5 148 aa12.01□□□□□ -0.49
SRSF4-202ENST00000466448 BAGE2Q86Y30 109 aa12□□□□□ -0.49
SRSF4-202ENST00000466448 hDV102S1A0JD36 115 aa11.99□□□□□ -0.49
SRSF4-202ENST00000466448 SMIM17P0DL12 118 aa11.99□□□□□ -0.49
SRSF4-202ENST00000466448 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
SRSF4-202ENST00000466448 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
SRSF4-202ENST00000466448 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
SRSF4-202ENST00000466448 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
SRSF4-202ENST00000466448 M0QY20 66 aa11.97□□□□□ -0.49
SRSF4-202ENST00000466448 IFNA1P01562 189 aa11.97□□□□□ -0.49
SRSF4-202ENST00000466448 CCL20P78556 96 aa11.97□□□□□ -0.49
SRSF4-202ENST00000466448 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
SRSF4-202ENST00000466448 SLPIP03973 132 aa11.96□□□□□ -0.49
SRSF4-202ENST00000466448 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
SRSF4-202ENST00000466448 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 A0A087WYN8 130 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 P01737 135 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 MGPP08493 103 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 TAGLN2P37802 199 aaKnown RBP11.95□□□□□ -0.5
SRSF4-202ENST00000466448 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
SRSF4-202ENST00000466448 IGLV4-60A0A075B6I1 120 aa11.94□□□□□ -0.5
SRSF4-202ENST00000466448 SUMO4Q6EEV6 95 aa11.94□□□□□ -0.5
SRSF4-202ENST00000466448 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
SRSF4-202ENST00000466448 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.93□□□□□ -0.5
SRSF4-202ENST00000466448 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 GZMBP10144 247 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 NKX2-5P52952 324 aaPredicted RBP11.93□□□□□ -0.5
SRSF4-202ENST00000466448 BLOC1S1P78537 153 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
SRSF4-202ENST00000466448 H7C1H1 209 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms