RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CLPSL2Q6UWE3 100 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 PANO1I0J062 215 aa13.32□□□□□ -0.28
COL6A1-203ENST00000466285 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-203ENST00000466285 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
COL6A1-203ENST00000466285 HLA-DQA1P01909 254 aa13.31□□□□□ -0.28
COL6A1-203ENST00000466285 C1orf43Q9BWL3 253 aa13.31□□□□□ -0.28
COL6A1-203ENST00000466285 TMEM262E9PQX1 116 aa13.3□□□□□ -0.28
COL6A1-203ENST00000466285 PRSS1P07477 247 aa13.3□□□□□ -0.28
COL6A1-203ENST00000466285 SULT1A2P50226 295 aa13.3□□□□□ -0.28
COL6A1-203ENST00000466285 SSTP61278 116 aa13.3□□□□□ -0.28
COL6A1-203ENST00000466285 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
COL6A1-203ENST00000466285 KRTAP26-1Q6PEX3 210 aa13.3□□□□□ -0.28
COL6A1-203ENST00000466285 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
COL6A1-203ENST00000466285 RAB5CP51148 216 aa13.29□□□□□ -0.28
COL6A1-203ENST00000466285 RAB4BP61018 213 aa13.29□□□□□ -0.28
COL6A1-203ENST00000466285 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
COL6A1-203ENST00000466285 MLST8Q9BVC4 326 aa13.29□□□□□ -0.28
COL6A1-203ENST00000466285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-203ENST00000466285 SNAI2O43623 268 aa13.28□□□□□ -0.28
COL6A1-203ENST00000466285 ELOBQ15370 118 aa13.28□□□□□ -0.28
COL6A1-203ENST00000466285 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
COL6A1-203ENST00000466285 KIF25-AS1Q9Y6Z4 181 aa13.28□□□□□ -0.28
COL6A1-203ENST00000466285 CRPP02741 224 aa13.27□□□□□ -0.29
COL6A1-203ENST00000466285 Q0VG73 95 aa13.27□□□□□ -0.29
COL6A1-203ENST00000466285 CHCHD5Q9BSY4 110 aa13.27□□□□□ -0.29
COL6A1-203ENST00000466285 GAGE6Q13070 117 aa13.26□□□□□ -0.29
COL6A1-203ENST00000466285 KCNIP4Q6PIL6 250 aa13.26□□□□□ -0.29
COL6A1-203ENST00000466285 FAM213BQ8TBF2 198 aa13.26□□□□□ -0.29
COL6A1-203ENST00000466285 TCEAL7Q9BRU2 100 aa13.26□□□□□ -0.29
COL6A1-203ENST00000466285 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-203ENST00000466285 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
COL6A1-203ENST00000466285 RBX1P62877 108 aa13.25□□□□□ -0.29
COL6A1-203ENST00000466285 CXCL1P09341 107 aa13.24□□□□□ -0.29
COL6A1-203ENST00000466285 GZMBP10144 247 aa13.24□□□□□ -0.29
COL6A1-203ENST00000466285 RPL37AP61513 92 aaKnown RBP13.24□□□□□ -0.29
COL6A1-203ENST00000466285 SFT2D1Q8WV19 159 aa13.24□□□□□ -0.29
COL6A1-203ENST00000466285 DERL1Q9BUN8 251 aa13.24□□□□□ -0.29
COL6A1-203ENST00000466285 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
COL6A1-203ENST00000466285 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
COL6A1-203ENST00000466285 LINC00269Q8N2A0 174 aa13.23□□□□□ -0.29
COL6A1-203ENST00000466285 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
COL6A1-203ENST00000466285 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
COL6A1-203ENST00000466285 F5H697 171 aa13.22□□□□□ -0.29
COL6A1-203ENST00000466285 OXTP01178 125 aa13.22□□□□□ -0.29
COL6A1-203ENST00000466285 OR5AL1P0C617 328 aa13.22□□□□□ -0.29
COL6A1-203ENST00000466285 C14orf177Q52M58 125 aa13.22□□□□□ -0.29
COL6A1-203ENST00000466285 GFRA4Q9GZZ7 299 aa13.22□□□□□ -0.29
COL6A1-203ENST00000466285 IGLV10-54A0A075B6I4 117 aa13.21□□□□□ -0.29
COL6A1-203ENST00000466285 MIAQ16674 131 aa13.21□□□□□ -0.29
COL6A1-203ENST00000466285 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
COL6A1-203ENST00000466285 TEX261Q6UWH6 196 aa13.21□□□□□ -0.29
COL6A1-203ENST00000466285 LYPD6BQ8NI32 183 aa13.21□□□□□ -0.29
COL6A1-203ENST00000466285 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
COL6A1-203ENST00000466285 C9orf163Q8N9P6 203 aa13.2□□□□□ -0.3
COL6A1-203ENST00000466285 CCL20P78556 96 aa13.19□□□□□ -0.3
COL6A1-203ENST00000466285 MGPP08493 103 aa13.18□□□□□ -0.3
COL6A1-203ENST00000466285 RPL35P42766 123 aaKnown RBP13.18□□□□□ -0.3
COL6A1-203ENST00000466285 SERTAD4-AS1Q5TG53 156 aa13.18□□□□□ -0.3
COL6A1-203ENST00000466285 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
COL6A1-203ENST00000466285 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
COL6A1-203ENST00000466285 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
COL6A1-203ENST00000466285 M0QY20 66 aa13.17□□□□□ -0.3
COL6A1-203ENST00000466285 IGLC6P0CF74 106 aa13.17□□□□□ -0.3
COL6A1-203ENST00000466285 MT1HL1P0DM35 61 aa13.17□□□□□ -0.3
COL6A1-203ENST00000466285 TNXBP22105 4242 aa13.17□□□□□ -0.3
COL6A1-203ENST00000466285 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 SLPIP03973 132 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 S100A9P06702 114 aaKnown RBP13.16□□□□□ -0.3
COL6A1-203ENST00000466285 CHTF8P0CG12 524 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 IQCJQ1A5X6 159 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 SDIM1Q6ZPB5 146 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
COL6A1-203ENST00000466285 TRBV25-1A0A075B6N4 114 aa13.15□□□□□ -0.3
COL6A1-203ENST00000466285 BLOC1S1P78537 153 aa13.15□□□□□ -0.3
COL6A1-203ENST00000466285 CENPWQ5EE01 88 aa13.15□□□□□ -0.3
COL6A1-203ENST00000466285 PLA2G2DQ9UNK4 145 aa13.15□□□□□ -0.3
COL6A1-203ENST00000466285 IFITM2Q01629 132 aa13.14□□□□□ -0.31
COL6A1-203ENST00000466285 REG3AQ06141 175 aa13.14□□□□□ -0.31
COL6A1-203ENST00000466285 C11orf52Q96A22 123 aa13.14□□□□□ -0.31
COL6A1-203ENST00000466285 IGHV1-24A0A0C4DH33 117 aa13.13□□□□□ -0.31
COL6A1-203ENST00000466285 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
COL6A1-203ENST00000466285 C19orf71A6NCJ1 209 aa13.12□□□□□ -0.31
COL6A1-203ENST00000466285 SMIM17P0DL12 118 aa13.12□□□□□ -0.31
COL6A1-203ENST00000466285 FER1L6-AS1Q8NA97 138 aa13.12□□□□□ -0.31
COL6A1-203ENST00000466285 MANBALQ9NQG1 85 aa13.12□□□□□ -0.31
COL6A1-203ENST00000466285 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
COL6A1-203ENST00000466285 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
COL6A1-203ENST00000466285 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
COL6A1-203ENST00000466285 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
COL6A1-203ENST00000466285 PKIAP61925 76 aa13.11□□□□□ -0.31
COL6A1-203ENST00000466285 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
COL6A1-203ENST00000466285 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
COL6A1-203ENST00000466285 CNBPP62633 177 aaKnown RBP13.1□□□□□ -0.31
COL6A1-203ENST00000466285 TMEM97Q5BJF2 176 aa13.1□□□□□ -0.31
COL6A1-203ENST00000466285 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
COL6A1-203ENST00000466285 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-203ENST00000466285 BCL2P10415 239 aa13.08□□□□□ -0.32
COL6A1-203ENST00000466285 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms