RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 GOLGA3Q08378 1498 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 SPEF2Q9C093 1822 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 ARFGEF1Q9Y6D6 1849 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 TRBV10-3A0A0K0K1G6 114 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 FAM25AB3EWG3 89 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 FAM25CB3EWG5 89 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 FAM25GB3EWG6 89 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 SMIM6P0DI80 62 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 HIST1H1DP16402 221 aaKnown RBP0.11□□□□□ -2.39
CCDC93-205ENST00000466171 ARPC4P59998 168 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 INSL4Q14641 139 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 UBE2DNLQ8IWF7 75 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 SDF2Q99470 211 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 PDCD10Q9BUL8 212 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 FAM107BQ9H098 131 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 LINC00312Q9Y6C7 94 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
CCDC93-205ENST00000466171 MED13LQ71F56 2210 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 LAMB1P07942 1786 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 CASKIN1Q8WXD9 1431 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 BDP1A6H8Y1 2624 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 JMJD1CQ15652 2540 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 MYH6P13533 1939 aa0.11□□□□□ -2.39
CCDC93-205ENST00000466171 PARP14Q460N5 1801 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 CLPSL1A2RUU4 121 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 ZNF818PQ6ZRF7 136 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 WFDC6Q9BQY6 131 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 NPVFQ9HCQ7 196 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 CCDC167Q9P0B6 97 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 BICRAQ9NZM4 1560 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 GRIN2AQ12879 1464 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 ZNF518AQ6AHZ1 1483 aa0.1□□□□□ -2.39
CCDC93-205ENST00000466171 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.39
CCDC93-205ENST00000466171 ZNF815PA8K554 130 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 G3V318 75 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 RBM3P98179 157 aaKnown RBP0.09□□□□□ -2.4
CCDC93-205ENST00000466171 CCDC58Q4VC31 144 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 SSBP3-AS1Q7Z2R9 100 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 BAGE3Q86Y29 109 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 SIPA1L3O60292 1781 aaPredicted RBP0.09□□□□□ -2.4
CCDC93-205ENST00000466171 AKAP11Q9UKA4 1901 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 CACNA1HO95180 2353 aa0.09□□□□□ -2.4
CCDC93-205ENST00000466171 IFT172Q9UG01 1749 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 HCG22E2RYF7 251 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 GNG7O60262 68 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 PPP1R17O96001 155 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 IFITM1P13164 125 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 CCL8P80075 99 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 CFAP126Q5VTH2 177 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 COPS9Q8WXC6 57 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 ARL11Q969Q4 196 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 DPH3Q96FX2 82 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 TSC22D3Q99576 134 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 PAIP2BQ9ULR5 123 aaKnown RBP0.08□□□□□ -2.4
CCDC93-205ENST00000466171 ZMYM4Q5VZL5 1548 aa0.08□□□□□ -2.4
CCDC93-205ENST00000466171 NWD2Q9ULI1 1742 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 MAST4O15021 2626 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 PIEZO1Q92508 2521 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 LRRC37A3O60309 1634 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 TRAV13-2A0A0B4J235 113 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 AQP10Q96PS8 301 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 LINC00470Q9BZP3 86 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 IFT140Q96RY7 1462 aa0.07□□□□□ -2.4
CCDC93-205ENST00000466171 ABCA12Q86UK0 2595 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 CFTRP13569 1480 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 PIGBOS1A0A0B4J2F0 54 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 CTXND1A0A1B0GTU2 59 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 NDUFA2O43678 99 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 SIX6O95475 246 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 CFDP00746 253 aaPredicted RBP0.06□□□□□ -2.4
CCDC93-205ENST00000466171 CCL18P55774 89 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 S100A12P80511 92 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 MEIG1Q5JSS6 88 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 C10orf128Q5T292 105 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 LSM10Q969L4 123 aaKnown RBP0.06□□□□□ -2.4
CCDC93-205ENST00000466171 AGPAT4-IT1Q9H0P7 198 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 SCN3BQ9NY72 215 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 PRO0255Q9UI72 69 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 R4GMQ9 66 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 U3KQA8 63 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 ZFYVE26Q68DK2 2539 aa0.06□□□□□ -2.4
CCDC93-205ENST00000466171 ZNF609O15014 1411 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 MRC1P22897 1456 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 PHLPP1O60346 1717 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 ARAP2Q8WZ64 1704 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 MIF4GDA9UHW6 222 aaKnown RBP0.05□□□□□ -2.4
CCDC93-205ENST00000466171 PIN1P1O15428 100 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 SELENOWP63302 87 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 TTC9CQ8N5M4 171 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 Q8N8P6 123 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 RERGLQ9H628 205 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 SERP1Q9Y6X1 66 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 CADP27708 2225 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 MYO7AQ13402 2215 aa0.05□□□□□ -2.4
CCDC93-205ENST00000466171 PRDM2Q13029 1718 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
CCDC93-205ENST00000466171 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
CCDC93-205ENST00000466171 DOCK11Q5JSL3 2073 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms