RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 A0A087WX48 190 aa12.71□□□□□ -0.37
CHKB-204ENST00000465842 A8MWL6 223 aa12.71□□□□□ -0.37
CHKB-204ENST00000465842 LAGE3Q14657 143 aa12.71□□□□□ -0.37
CHKB-204ENST00000465842 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.37
CHKB-204ENST00000465842 LINC01551Q86U37 167 aa12.71□□□□□ -0.37
CHKB-204ENST00000465842 PEA15Q15121 130 aa12.7□□□□□ -0.38
CHKB-204ENST00000465842 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
CHKB-204ENST00000465842 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
CHKB-204ENST00000465842 NIT1Q86X76 327 aa12.7□□□□□ -0.38
CHKB-204ENST00000465842 BORCS7Q96B45 105 aa12.7□□□□□ -0.38
CHKB-204ENST00000465842 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
CHKB-204ENST00000465842 A0A087WTM6 91 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 TRBV6-8A0A0A6YYG3 113 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 KRTAP10-2P60368 255 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 TMEM97Q5BJF2 176 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 PGLYRP4Q96LB8 373 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
CHKB-204ENST00000465842 TRAV8-3A0A0A6YYJ7 113 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 M0QY20 66 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 FAM74A3Q4VXF1 159 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 CT83Q5H943 113 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 RASL11AQ6T310 242 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
CHKB-204ENST00000465842 ELOBQ15370 118 aa12.67□□□□□ -0.38
CHKB-204ENST00000465842 TMEM241Q24JQ0 296 aa12.67□□□□□ -0.38
CHKB-204ENST00000465842 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
CHKB-204ENST00000465842 OSTCQ9NRP0 149 aa12.66□□□□□ -0.38
CHKB-204ENST00000465842 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
CHKB-204ENST00000465842 PKIAP61925 76 aa12.65□□□□□ -0.38
CHKB-204ENST00000465842 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.38
CHKB-204ENST00000465842 ADIRFQ15847 76 aa12.65□□□□□ -0.38
CHKB-204ENST00000465842 PGPEP1Q9NXJ5 209 aa12.65□□□□□ -0.38
CHKB-204ENST00000465842 PKD1P98161 4303 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 C9JQL5 133 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHKB-204ENST00000465842 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 RMI2Q96E14 147 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 NAT8Q9UHE5 227 aa12.64□□□□□ -0.39
CHKB-204ENST00000465842 TRBV25-1A0A075B6N4 114 aa12.63□□□□□ -0.39
CHKB-204ENST00000465842 RAB14P61106 215 aa12.63□□□□□ -0.39
CHKB-204ENST00000465842 ISOC2Q96AB3 205 aa12.63□□□□□ -0.39
CHKB-204ENST00000465842 UBE2WQ96B02 151 aa12.63□□□□□ -0.39
CHKB-204ENST00000465842 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
CHKB-204ENST00000465842 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
CHKB-204ENST00000465842 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
CHKB-204ENST00000465842 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
CHKB-204ENST00000465842 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
CHKB-204ENST00000465842 IGKV2D-24A0A075B6R9 120 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 TRAV26-2A0A0B4J265 109 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 CRPP02741 224 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
CHKB-204ENST00000465842 GAGE6Q13070 117 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 MPV17L2Q567V2 206 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 NTM-AS1Q6ZSK4 140 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 COX11Q9Y6N1 276 aa12.61□□□□□ -0.39
CHKB-204ENST00000465842 ANGP03950 147 aaKnown RBP12.6□□□□□ -0.39
CHKB-204ENST00000465842 GATD1Q8NB37 220 aa12.6□□□□□ -0.39
CHKB-204ENST00000465842 V9GYV3 84 aa12.6□□□□□ -0.39
CHKB-204ENST00000465842 LRCOL1A6NCL2 159 aa12.59□□□□□ -0.39
CHKB-204ENST00000465842 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
CHKB-204ENST00000465842 Q0VG73 95 aa12.59□□□□□ -0.39
CHKB-204ENST00000465842 FRZBQ92765 325 aa12.59□□□□□ -0.39
CHKB-204ENST00000465842 COTL1Q14019 142 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 IQCJQ1A5X6 159 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 ATRAIDQ6UW56 229 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 Q8N976 141 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
CHKB-204ENST00000465842 IGLV5-52A0A0A0MRZ9 124 aa12.57□□□□□ -0.4
CHKB-204ENST00000465842 CDK2AP2O75956 126 aa12.57□□□□□ -0.4
CHKB-204ENST00000465842 RIGQ13278 110 aa12.57□□□□□ -0.4
CHKB-204ENST00000465842 Q8N814 137 aa12.57□□□□□ -0.4
CHKB-204ENST00000465842 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
CHKB-204ENST00000465842 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
CHKB-204ENST00000465842 UBE2L6O14933 153 aa12.56□□□□□ -0.4
CHKB-204ENST00000465842 LECT2O14960 151 aa12.56□□□□□ -0.4
CHKB-204ENST00000465842 AMTP48728 403 aa12.56□□□□□ -0.4
CHKB-204ENST00000465842 C1orf43Q9BWL3 253 aa12.56□□□□□ -0.4
CHKB-204ENST00000465842 NAT8BQ9UHF3 227 aa12.56□□□□□ -0.4
CHKB-204ENST00000465842 RBX1P62877 108 aa12.55□□□□□ -0.4
CHKB-204ENST00000465842 NUP35Q8NFH5 326 aa12.55□□□□□ -0.4
CHKB-204ENST00000465842 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
CHKB-204ENST00000465842 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
CHKB-204ENST00000465842 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
CHKB-204ENST00000465842 CLPSL2Q6UWE3 100 aa12.54□□□□□ -0.4
CHKB-204ENST00000465842 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
CHKB-204ENST00000465842 GCSHP23434 173 aa12.53□□□□□ -0.4
CHKB-204ENST00000465842 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
CHKB-204ENST00000465842 WFDC2Q14508 124 aa12.52□□□□□ -0.41
CHKB-204ENST00000465842 AMN1Q8IY45 258 aa12.52□□□□□ -0.41
CHKB-204ENST00000465842 LINC00269Q8N2A0 174 aa12.52□□□□□ -0.41
CHKB-204ENST00000465842 SMIM27A0A1W2PRY6 76 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms