RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 ZNF833PQ6ZTB9 187 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 CYTL1Q9NRR1 136 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 CACFD1Q9UGQ2 172 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 ACACBO00763 2458 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 SCN4AP35499 1836 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 CENPFP49454 3210 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 LRRIQ1Q96JM4 1722 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 EEA1Q15075 1411 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 ANKARQ7Z5J8 1434 aa2.51□□□□□ -2.01
VPS8-217ENST00000465213 TET3O43151 1660 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 DOCK1Q14185 1865 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 CFAP54Q96N23 3096 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 TMSB15BA0A087X1C1 80 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 TRAV13-2A0A0B4J235 113 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 MUC21A0A140T8X8 626 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 CCL16O15467 120 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 IGKV3-11P04433 115 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 HINT1P49773 126 aaPredicted RBP2.5□□□□□ -2.01
VPS8-217ENST00000465213 GNG11P61952 73 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 UBE2G1P62253 170 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 LY6EQ16553 131 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 DEFB113Q30KQ7 82 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 KRTAP26-1Q6PEX3 210 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 DEFB123Q8N688 67 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 OR10AG1Q8NH19 301 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 R4GN34 69 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 SLIT3O75094 1523 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.5□□□□□ -2.01
VPS8-217ENST00000465213 SHPRHQ149N8 1683 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 ANK1P16157 1881 aa2.5□□□□□ -2.01
VPS8-217ENST00000465213 COL24A1Q17RW2 1714 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 PEAK1Q9H792 1746 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 SETD2Q9BYW2 2564 aaPredicted RBP2.49□□□□□ -2.01
VPS8-217ENST00000465213 PCNX2A6NKB5 2137 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 KALRNO60229 2985 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 MPV17LQ2QL34 196 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 Q8N9L7 120 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 FAM213BQ8TBF2 198 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 C4orf3Q8WVX3 66 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 SPCS1Q9Y6A9 102 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 GOLGA3Q08378 1498 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 NCOR2Q9Y618 2525 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 NACAE9PAV3 2078 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 TUBGCP6Q96RT7 1819 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 CASZ1Q86V15 1759 aa2.49□□□□□ -2.01
VPS8-217ENST00000465213 MYH8P13535 1937 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 DNAH12Q6ZR08 3092 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 MON2Q7Z3U7 1717 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 DISP1Q96F81 1524 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 DIDO1Q9BTC0 2240 aaKnown RBP2.48□□□□□ -2.01
VPS8-217ENST00000465213 ATP10BO94823 1461 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 NLRP1Q9C000 1473 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 TRBV7-1A0A0A6YYK4 115 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 TRAV17A0A0B4J275 112 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 IGHV3-33P01772 117 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 IGLC2P0DOY2 106 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 IGLC3P0DOY3 106 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 PDE6HQ13956 83 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 Q8TAT8 98 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 C22orf24Q9Y442 160 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 MYO9AB2RTY4 2548 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 ABCA8O94911 1581 aa2.48□□□□□ -2.01
VPS8-217ENST00000465213 ZC3H13Q5T200 1668 aaKnown RBP2.47□□□□□ -2.01
VPS8-217ENST00000465213 NRXN1Q9ULB1 1477 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 PTPN23Q9H3S7 1636 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 LAMB4A4D0S4 1761 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 LAMB1P07942 1786 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 CXorf51AA0A1B0GTR3 108 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 A0A1W2PPM0 123 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 CRYM-AS1A6NIL9 109 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 SYS1-DBNDD2H3BUS1 97 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 BCE1O60756 84 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 SIX6O95475 246 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 P0C880 135 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 RNASE2P10153 161 aaKnown RBP2.47□□□□□ -2.01
VPS8-217ENST00000465213 HMGN3Q15651 99 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 Q6ZTI0 123 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 LINC01600Q96MT4 127 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 CNOT1A5YKK6 2376 aaKnown RBP2.47□□□□□ -2.01
VPS8-217ENST00000465213 TNS1Q9HBL0 1735 aaKnown RBP2.47□□□□□ -2.01
VPS8-217ENST00000465213 CPAMD8Q8IZJ3 1885 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 WIZO95785 1651 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 KIAA1549LQ6ZVL6 1849 aa2.47□□□□□ -2.01
VPS8-217ENST00000465213 RGPD4Q7Z3J3 1758 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 TMEM131LA2VDJ0 1609 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 KIF14Q15058 1648 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 CEP290O15078 2479 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 C5orf42Q9H799 3197 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 IGLV3-16A0A075B6K0 115 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 KANTRA0A1W2PQU2 76 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 HCG22E2RYF7 251 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 CFDP00746 253 aaPredicted RBP2.46□□□□□ -2.02
VPS8-217ENST00000465213 FREM3P0C091 2139 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 C9orf163Q8N9P6 203 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 TIMM21Q9BVV7 248 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 LINC00474Q9P2X8 69 aa2.46□□□□□ -2.02
VPS8-217ENST00000465213 KIAA1549Q9HCM3 1950 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms