RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NUP35Q8NFH5 326 aa9.89□□□□□ -0.83
SQSTM1-205ENST00000464493 KRTAP1-5Q9BYS1 174 aa9.89□□□□□ -0.83
SQSTM1-205ENST00000464493 IGHV3-38A0A0C4DH36 116 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 RTL8CO15255 209 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 DNAH10OSP0CZ25 163 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 TNFRSF18Q9Y5U5 241 aa9.88□□□□□ -0.83
SQSTM1-205ENST00000464493 K7EP13 123 aa9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 RIGQ13278 110 aa9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 LINC00336Q6ZUF6 198 aa9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.87□□□□□ -0.83
SQSTM1-205ENST00000464493 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 TMEM218A2RU14 115 aa9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 PPP1R2P9O14990 202 aa9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 BTF3P20290 206 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 NIT2Q9NQR4 276 aa9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
SQSTM1-205ENST00000464493 LINC00862A6NCI5 91 aa9.85□□□□□ -0.83
SQSTM1-205ENST00000464493 F8W036 122 aa9.85□□□□□ -0.83
SQSTM1-205ENST00000464493 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
SQSTM1-205ENST00000464493 GATD1Q8NB37 220 aa9.85□□□□□ -0.83
SQSTM1-205ENST00000464493 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
SQSTM1-205ENST00000464493 FAT2Q9NYQ8 4349 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 MT-ND4LP03901 98 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 ADCYAP1P18509 176 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 C10orf126Q8N4M7 172 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 FRZBQ92765 325 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 ANAPC16Q96DE5 110 aa9.84□□□□□ -0.83
SQSTM1-205ENST00000464493 TRBV6-8A0A0A6YYG3 113 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
SQSTM1-205ENST00000464493 A0A1B0GW15 77 aa9.82□□□□□ -0.84
SQSTM1-205ENST00000464493 SEC11CQ9BY50 192 aa9.82□□□□□ -0.84
SQSTM1-205ENST00000464493 RAB4AP20338 218 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 CAMPP49913 170 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 NIT1Q86X76 327 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 RPL39LQ96EH5 51 aaKnown RBP9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 RNF185Q96GF1 192 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 URGCP-MRPS24S4R325 110 aa9.81□□□□□ -0.84
SQSTM1-205ENST00000464493 EPPK1P58107 5090 aaKnown RBP9.8□□□□□ -0.84
SQSTM1-205ENST00000464493 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
SQSTM1-205ENST00000464493 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
SQSTM1-205ENST00000464493 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
SQSTM1-205ENST00000464493 Q8N3U1 123 aa9.8□□□□□ -0.84
SQSTM1-205ENST00000464493 TMEM262E9PQX1 116 aa9.79□□□□□ -0.84
SQSTM1-205ENST00000464493 S100A8P05109 93 aa9.79□□□□□ -0.84
SQSTM1-205ENST00000464493 MRPL54Q6P161 138 aaKnown RBP9.79□□□□□ -0.84
SQSTM1-205ENST00000464493 MRAP2Q96G30 205 aa9.79□□□□□ -0.84
SQSTM1-205ENST00000464493 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 A0A087WX48 190 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 GAS8-AS1O95177 125 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 HBBP68871 147 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 TNP2Q05952 138 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 C10orf91Q5T1B1 145 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 FAM104BQ5XKR9 115 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 ATP5L2Q7Z4Y8 100 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 CHCHD5Q9BSY4 110 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 PKD1P98161 4303 aa9.78□□□□□ -0.84
SQSTM1-205ENST00000464493 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 A0A1B0GXF2 115 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 IQCJQ1A5X6 159 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 Q6ZRN7 208 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
SQSTM1-205ENST00000464493 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 PKIAP61925 76 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 COTL1Q14019 142 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 LAGE3Q14657 143 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
SQSTM1-205ENST00000464493 SMKR1H3BMG3 65 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 PPP1R17O96001 155 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 RPS10P46783 165 aaKnown RBP9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 ELOBQ15370 118 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 IMMP2LQ96T52 175 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 Q9HAA7 133 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 KLK12Q9UKR0 248 aa9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
SQSTM1-205ENST00000464493 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 I3L3M4 83 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 NCR2O95944 276 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 PMCHP20382 165 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 GAGE6Q13070 117 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms