RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 NAT8BQ9UHF3 227 aa12.84□□□□□ -0.35
HMG20B-208ENST00000464304 TIRAPP58753 221 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
HMG20B-208ENST00000464304 RHEBQ15382 184 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 Q6ZR54 194 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
HMG20B-208ENST00000464304 CTDSP1Q9GZU7 261 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 GTSF1LQ9H1H1 148 aa12.83□□□□□ -0.36
HMG20B-208ENST00000464304 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
HMG20B-208ENST00000464304 M0QY20 66 aa12.82□□□□□ -0.36
HMG20B-208ENST00000464304 UBE2D3P61077 147 aa12.82□□□□□ -0.36
HMG20B-208ENST00000464304 UBE2D2P62837 147 aa12.82□□□□□ -0.36
HMG20B-208ENST00000464304 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
HMG20B-208ENST00000464304 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
HMG20B-208ENST00000464304 SIVA1O15304 175 aa12.81□□□□□ -0.36
HMG20B-208ENST00000464304 SNAPINO95295 136 aa12.81□□□□□ -0.36
HMG20B-208ENST00000464304 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
HMG20B-208ENST00000464304 C7orf77A4D0Y5 90 aa12.8□□□□□ -0.36
HMG20B-208ENST00000464304 RIGQ13278 110 aa12.8□□□□□ -0.36
HMG20B-208ENST00000464304 A0A087WWC5 75 aa12.79□□□□□ -0.36
HMG20B-208ENST00000464304 H7C1H1 209 aa12.79□□□□□ -0.36
HMG20B-208ENST00000464304 LELP1Q5T871 98 aa12.79□□□□□ -0.36
HMG20B-208ENST00000464304 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
HMG20B-208ENST00000464304 TMEM242Q9NWH2 141 aa12.79□□□□□ -0.36
HMG20B-208ENST00000464304 TRAV26-2A0A0B4J265 109 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 OR10J3Q5JRS4 329 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
HMG20B-208ENST00000464304 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
HMG20B-208ENST00000464304 GATD1Q8NB37 220 aa12.77□□□□□ -0.37
HMG20B-208ENST00000464304 DNAJC30Q96LL9 226 aa12.77□□□□□ -0.37
HMG20B-208ENST00000464304 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.37
HMG20B-208ENST00000464304 HECTD4Q9Y4D8 3996 aa12.77□□□□□ -0.37
HMG20B-208ENST00000464304 TRAV8-6A0A0B4J262 113 aa12.76□□□□□ -0.37
HMG20B-208ENST00000464304 MRPL54Q6P161 138 aaKnown RBP12.76□□□□□ -0.37
HMG20B-208ENST00000464304 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
HMG20B-208ENST00000464304 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
HMG20B-208ENST00000464304 A0A1B0GW15 77 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 S100PP25815 95 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 CAMPP49913 170 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 NIT2Q9NQR4 276 aa12.75□□□□□ -0.37
HMG20B-208ENST00000464304 KIAA1109Q2LD37 5005 aa12.74□□□□□ -0.37
HMG20B-208ENST00000464304 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
HMG20B-208ENST00000464304 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
HMG20B-208ENST00000464304 A0A1B0GXF2 115 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 A6NJY4 79 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 S100A8P05109 93 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 RAB4AP20338 218 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 ATP5L2Q7Z4Y8 100 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 BTF3L4Q96K17 158 aa12.73□□□□□ -0.37
HMG20B-208ENST00000464304 GAS8-AS1O95177 125 aa12.72□□□□□ -0.37
HMG20B-208ENST00000464304 DAZ4Q86SG3 579 aaKnown RBP12.72□□□□□ -0.37
HMG20B-208ENST00000464304 DAZ3Q9NR90 486 aaKnown RBP12.72□□□□□ -0.37
HMG20B-208ENST00000464304 RYR1P21817 5038 aa12.72□□□□□ -0.37
HMG20B-208ENST00000464304 TRAV9-1A0A075B6T8 112 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 RTL8CO15255 209 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 HBBP68871 147 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 LINC01556Q5JQF7 62 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 C1orf134Q5TEV5 83 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 Q8N3U1 123 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-208ENST00000464304 FRZBQ92765 325 aa12.71□□□□□ -0.37
HMG20B-208ENST00000464304 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 IGHV3-33P01772 117 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 IGHV3-30-3P0DP02 117 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 C6orf223Q8N319 242 aa12.7□□□□□ -0.38
HMG20B-208ENST00000464304 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
HMG20B-208ENST00000464304 MRAP2Q96G30 205 aa12.69□□□□□ -0.38
HMG20B-208ENST00000464304 TRAV9-2A0A087WT02 112 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 NCR2O95944 276 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
HMG20B-208ENST00000464304 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 DEFB104AQ8WTQ1 72 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 URGCP-MRPS24S4R325 110 aa12.68□□□□□ -0.38
HMG20B-208ENST00000464304 NIT1Q86X76 327 aa12.67□□□□□ -0.38
HMG20B-208ENST00000464304 TRBV6-5A0A0K0K1A5 114 aa12.66□□□□□ -0.38
HMG20B-208ENST00000464304 SDHAF1A6NFY7 115 aa12.66□□□□□ -0.38
HMG20B-208ENST00000464304 K7EP13 123 aa12.66□□□□□ -0.38
HMG20B-208ENST00000464304 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
HMG20B-208ENST00000464304 C10orf126Q8N4M7 172 aa12.66□□□□□ -0.38
HMG20B-208ENST00000464304 TRBV25-1A0A075B6N4 114 aa12.65□□□□□ -0.38
HMG20B-208ENST00000464304 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
HMG20B-208ENST00000464304 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
HMG20B-208ENST00000464304 NRACQ8N912 160 aa12.64□□□□□ -0.39
HMG20B-208ENST00000464304 CHCHD5Q9BSY4 110 aa12.64□□□□□ -0.39
HMG20B-208ENST00000464304 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
HMG20B-208ENST00000464304 BTF3P20290 206 aaKnown RBP12.63□□□□□ -0.39
HMG20B-208ENST00000464304 COTL1Q14019 142 aa12.63□□□□□ -0.39
HMG20B-208ENST00000464304 LINC00336Q6ZUF6 198 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms