RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 RIGQ13278 110 aa12.95□□□□□ -0.34
LMNB1-204ENST00000463908 Q6ZR54 194 aa12.95□□□□□ -0.34
LMNB1-204ENST00000463908 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
LMNB1-204ENST00000463908 SMIM15Q7Z3B0 74 aa12.94□□□□□ -0.34
LMNB1-204ENST00000463908 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
LMNB1-204ENST00000463908 TMEM191AQ9H0A3 160 aa12.94□□□□□ -0.34
LMNB1-204ENST00000463908 CARHSP1Q9Y2V2 147 aaKnown RBP12.94□□□□□ -0.34
LMNB1-204ENST00000463908 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
LMNB1-204ENST00000463908 RNF185Q96GF1 192 aa12.93□□□□□ -0.34
LMNB1-204ENST00000463908 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
LMNB1-204ENST00000463908 RASL11AQ6T310 242 aa12.92□□□□□ -0.34
LMNB1-204ENST00000463908 WFDC10BQ8IUB3 73 aa12.92□□□□□ -0.34
LMNB1-204ENST00000463908 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
LMNB1-204ENST00000463908 H7C1H1 209 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 SIVA1O15304 175 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 GAS8-AS1O95177 125 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 RAB4AP20338 218 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 LELP1Q5T871 98 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 DNAJC30Q96LL9 226 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 NIT2Q9NQR4 276 aa12.91□□□□□ -0.34
LMNB1-204ENST00000463908 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
LMNB1-204ENST00000463908 A0A1B0GXF2 115 aa12.9□□□□□ -0.34
LMNB1-204ENST00000463908 CAMPP49913 170 aa12.9□□□□□ -0.34
LMNB1-204ENST00000463908 MRPL54Q6P161 138 aaKnown RBP12.9□□□□□ -0.34
LMNB1-204ENST00000463908 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
LMNB1-204ENST00000463908 KRTAP1-5Q9BYS1 174 aa12.9□□□□□ -0.34
LMNB1-204ENST00000463908 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
LMNB1-204ENST00000463908 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
LMNB1-204ENST00000463908 DNAH2Q9P225 4427 aa12.89□□□□□ -0.35
LMNB1-204ENST00000463908 A0A1B0GW15 77 aa12.88□□□□□ -0.35
LMNB1-204ENST00000463908 C7orf77A4D0Y5 90 aa12.88□□□□□ -0.35
LMNB1-204ENST00000463908 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
LMNB1-204ENST00000463908 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
LMNB1-204ENST00000463908 CLRN3Q8NCR9 226 aa12.88□□□□□ -0.35
LMNB1-204ENST00000463908 RPL39LQ96EH5 51 aaKnown RBP12.88□□□□□ -0.35
LMNB1-204ENST00000463908 TRAV8-6A0A0B4J262 113 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 DNAH10OSP0CZ25 163 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 FAM104BQ5XKR9 115 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 NTM-AS1Q6ZSK4 140 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 FRZBQ92765 325 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 IMMP2LQ96T52 175 aa12.87□□□□□ -0.35
LMNB1-204ENST00000463908 A0A087WWC5 75 aa12.86□□□□□ -0.35
LMNB1-204ENST00000463908 DAZ4Q86SG3 579 aaKnown RBP12.86□□□□□ -0.35
LMNB1-204ENST00000463908 DAZ3Q9NR90 486 aaKnown RBP12.86□□□□□ -0.35
LMNB1-204ENST00000463908 HBBP68871 147 aa12.85□□□□□ -0.35
LMNB1-204ENST00000463908 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
LMNB1-204ENST00000463908 ATP5L2Q7Z4Y8 100 aa12.85□□□□□ -0.35
LMNB1-204ENST00000463908 TMEM242Q9NWH2 141 aa12.85□□□□□ -0.35
LMNB1-204ENST00000463908 HECTD4Q9Y4D8 3996 aa12.85□□□□□ -0.35
LMNB1-204ENST00000463908 TRBV6-8A0A0A6YYG3 113 aa12.84□□□□□ -0.35
LMNB1-204ENST00000463908 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
LMNB1-204ENST00000463908 APOC3P02656 99 aa12.84□□□□□ -0.35
LMNB1-204ENST00000463908 RPS10P46783 165 aaKnown RBP12.84□□□□□ -0.35
LMNB1-204ENST00000463908 Q8N3U1 123 aa12.84□□□□□ -0.35
LMNB1-204ENST00000463908 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
LMNB1-204ENST00000463908 LINC01556Q5JQF7 62 aa12.83□□□□□ -0.36
LMNB1-204ENST00000463908 DEFB104AQ8WTQ1 72 aa12.83□□□□□ -0.36
LMNB1-204ENST00000463908 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 RTL8CO15255 209 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 S100A8P05109 93 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 RHEBQ15382 184 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 BTF3L4Q96K17 158 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 RPS10P5Q9NQ39 176 aa12.82□□□□□ -0.36
LMNB1-204ENST00000463908 NCR2O95944 276 aa12.81□□□□□ -0.36
LMNB1-204ENST00000463908 TTC32Q5I0X7 151 aa12.81□□□□□ -0.36
LMNB1-204ENST00000463908 C1orf134Q5TEV5 83 aa12.81□□□□□ -0.36
LMNB1-204ENST00000463908 NRACQ8N912 160 aa12.81□□□□□ -0.36
LMNB1-204ENST00000463908 PCLOQ9Y6V0 5065 aa12.81□□□□□ -0.36
LMNB1-204ENST00000463908 IGHV3-30P01768 117 aa12.8□□□□□ -0.36
LMNB1-204ENST00000463908 IGHV3-33P01772 117 aa12.8□□□□□ -0.36
LMNB1-204ENST00000463908 IGHV3-30-3P0DP02 117 aa12.8□□□□□ -0.36
LMNB1-204ENST00000463908 IGHV3-30-5P0DP03 117 aa12.8□□□□□ -0.36
LMNB1-204ENST00000463908 NIT1Q86X76 327 aa12.8□□□□□ -0.36
LMNB1-204ENST00000463908 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
LMNB1-204ENST00000463908 TRAV9-2A0A087WT02 112 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 SDHAF1A6NFY7 115 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
LMNB1-204ENST00000463908 TMEM97Q5BJF2 176 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 SVBPQ8N300 66 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 C6orf223Q8N319 242 aa12.79□□□□□ -0.36
LMNB1-204ENST00000463908 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 K7EP13 123 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 ST20Q9HBF5 79 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 URGCP-MRPS24S4R325 110 aa12.78□□□□□ -0.36
LMNB1-204ENST00000463908 TRAV9-1A0A075B6T8 112 aa12.77□□□□□ -0.37
LMNB1-204ENST00000463908 SNAPINO95295 136 aa12.77□□□□□ -0.37
LMNB1-204ENST00000463908 TMEM70Q9BUB7 260 aa12.77□□□□□ -0.37
LMNB1-204ENST00000463908 RYR1P21817 5038 aa12.76□□□□□ -0.37
LMNB1-204ENST00000463908 IBA57-AS1B1ANH7 110 aa12.76□□□□□ -0.37
LMNB1-204ENST00000463908 CKS2P33552 79 aa12.76□□□□□ -0.37
LMNB1-204ENST00000463908 ATRAIDQ6UW56 229 aa12.76□□□□□ -0.37
LMNB1-204ENST00000463908 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
LMNB1-204ENST00000463908 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
LMNB1-204ENST00000463908 IGHV1-24A0A0C4DH33 117 aa12.75□□□□□ -0.37
LMNB1-204ENST00000463908 D6R8Y8 96 aa12.75□□□□□ -0.37
LMNB1-204ENST00000463908 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
LMNB1-204ENST00000463908 I3L3M4 83 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms