RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-205ENST00000463818 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 SSTP61278 116 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 ELOBQ15370 118 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 ZNF56Q15929 161 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 CHCHD7Q9BUK0 85 aa12.43□□□□□ -0.42
SF3A1-205ENST00000463818 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
SF3A1-205ENST00000463818 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
SF3A1-205ENST00000463818 OR5AL1P0C617 328 aa12.42□□□□□ -0.42
SF3A1-205ENST00000463818 TRBV6-8A0A0A6YYG3 113 aa12.41□□□□□ -0.42
SF3A1-205ENST00000463818 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
SF3A1-205ENST00000463818 Q8N976 141 aa12.41□□□□□ -0.42
SF3A1-205ENST00000463818 HERC1Q15751 4861 aa12.4□□□□□ -0.42
SF3A1-205ENST00000463818 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
SF3A1-205ENST00000463818 F5H697 171 aa12.4□□□□□ -0.42
SF3A1-205ENST00000463818 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
SF3A1-205ENST00000463818 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
SF3A1-205ENST00000463818 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
SF3A1-205ENST00000463818 Q0VG73 95 aa12.39□□□□□ -0.43
SF3A1-205ENST00000463818 LINC01620Q4KN68 170 aa12.38□□□□□ -0.43
SF3A1-205ENST00000463818 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
SF3A1-205ENST00000463818 Q6ZSA8 131 aa12.38□□□□□ -0.43
SF3A1-205ENST00000463818 FAM210AQ96ND0 272 aa12.38□□□□□ -0.43
SF3A1-205ENST00000463818 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
SF3A1-205ENST00000463818 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
SF3A1-205ENST00000463818 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
SF3A1-205ENST00000463818 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-205ENST00000463818 MED9Q9NWA0 146 aa12.37□□□□□ -0.43
SF3A1-205ENST00000463818 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
SF3A1-205ENST00000463818 FLG2Q5D862 2391 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-205ENST00000463818 RAB19A4D1S5 217 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 C19orf71A6NCJ1 209 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 GZMBP10144 247 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 GNG4P50150 75 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 C15orf54Q8N8G6 183 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 DAZAP1Q96EP5 407 aaKnown RBP12.36□□□□□ -0.43
SF3A1-205ENST00000463818 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
SF3A1-205ENST00000463818 MPV17L2Q567V2 206 aa12.35□□□□□ -0.43
SF3A1-205ENST00000463818 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
SF3A1-205ENST00000463818 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
SF3A1-205ENST00000463818 RPS20P60866 119 aaKnown RBP12.34□□□□□ -0.43
SF3A1-205ENST00000463818 TMEM97Q5BJF2 176 aa12.34□□□□□ -0.43
SF3A1-205ENST00000463818 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
SF3A1-205ENST00000463818 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
SF3A1-205ENST00000463818 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
SF3A1-205ENST00000463818 DMBT1Q9UGM3 2413 aaPredicted RBP12.33□□□□□ -0.43
SF3A1-205ENST00000463818 CRPP02741 224 aa12.33□□□□□ -0.44
SF3A1-205ENST00000463818 ANGP03950 147 aaKnown RBP12.33□□□□□ -0.44
SF3A1-205ENST00000463818 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
SF3A1-205ENST00000463818 FER1L6-AS1Q8NA97 138 aa12.33□□□□□ -0.44
SF3A1-205ENST00000463818 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
SF3A1-205ENST00000463818 MYCBP2O75592 4640 aa12.32□□□□□ -0.44
SF3A1-205ENST00000463818 PKIAP61925 76 aa12.32□□□□□ -0.44
SF3A1-205ENST00000463818 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
SF3A1-205ENST00000463818 MGPP08493 103 aa12.31□□□□□ -0.44
SF3A1-205ENST00000463818 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
SF3A1-205ENST00000463818 M0QY20 66 aa12.3□□□□□ -0.44
SF3A1-205ENST00000463818 CACNG7P62955 275 aa12.3□□□□□ -0.44
SF3A1-205ENST00000463818 GAGE6Q13070 117 aa12.3□□□□□ -0.44
SF3A1-205ENST00000463818 C14orf177Q52M58 125 aa12.3□□□□□ -0.44
SF3A1-205ENST00000463818 K7EN84 100 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 P01737 135 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 SRP19P09132 144 aaKnown RBP12.29□□□□□ -0.44
SF3A1-205ENST00000463818 RBX1P62877 108 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 MIAQ16674 131 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 EIF5A2Q9GZV4 153 aaKnown RBP12.29□□□□□ -0.44
SF3A1-205ENST00000463818 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
SF3A1-205ENST00000463818 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 F2Z2F3 143 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 H7C1H1 209 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 OCC1Q8TAD7 63 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
SF3A1-205ENST00000463818 IQCJQ1A5X6 159 aa12.27□□□□□ -0.45
SF3A1-205ENST00000463818 LINC00269Q8N2A0 174 aa12.27□□□□□ -0.45
SF3A1-205ENST00000463818 PRR34Q9NV39 138 aa12.27□□□□□ -0.45
SF3A1-205ENST00000463818 IGHV1-24A0A0C4DH33 117 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 USP17L23D6RBM5 183 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 NTF3P20783 257 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 CLPSL2Q6UWE3 100 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 FAM231DQ6ZW35 169 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 NUDT11Q96G61 164 aa12.26□□□□□ -0.45
SF3A1-205ENST00000463818 HLA-DQA1P01909 254 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 TRGC1P0CF51 173 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
SF3A1-205ENST00000463818 WDR73Q6P4I2 378 aa12.24□□□□□ -0.45
SF3A1-205ENST00000463818 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
SF3A1-205ENST00000463818 PRSS1P07477 247 aa12.23□□□□□ -0.45
SF3A1-205ENST00000463818 CTRLP40313 264 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms