RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TMEM200BQ69YZ2 307 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 C2orf66Q6UXQ4 117 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 WFDC9Q8NEX5 89 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RNASE6Q93091 150 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 DYNLRB1Q9NP97 96 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 C2CD3Q4AC94 2353 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 EML6Q6ZMW3 1958 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 WDR87Q6ZQQ6 2873 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 LILRA5A6NI73 299 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 DNAL4O96015 105 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 SAA1P0DJI8 122 aaPredicted RBP2.7□□□□□ -1.98
COL8A1-205ENST00000463753 HILS1P60008 231 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 Q8IYB0 196 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ITLN2Q8WWU7 325 aaPredicted RBP2.7□□□□□ -1.98
COL8A1-205ENST00000463753 DEFB126Q9BYW3 111 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF71Q9NQZ8 489 aaPredicted RBP2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ZNRD1Q9P1U0 126 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ARFGEF3Q5TH69 2177 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ZGRF1Q86YA3 2104 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 FREM1Q5H8C1 2179 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 EYSQ5T1H1 3165 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 NBPF19A0A087WUL8 3843 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 TRGV5A0A0B4J1U4 118 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 LINC01546A6NGU7 62 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 NDUFC2-KCTD14E9PQ53 114 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 PSMB8P28062 276 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF80P51504 273 aaPredicted RBP2.7□□□□□ -1.98
COL8A1-205ENST00000463753 IGFL4Q6B9Z1 124 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 STHQ8IWL8 128 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 SNURFQ9Y675 71 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 TNCP24821 2201 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ANK2Q01484 3957 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 LY6G6EA0A0G2JKS1 128 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 TRIOO75962 3097 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 NXPH4O95158 308 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 IGHG2P01859 326 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 XCL1P47992 114 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 SUB1P53999 127 aaKnown RBP eCLIP2.7□□□□□ -1.98
COL8A1-205ENST00000463753 WT1-ASQ06250 92 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 ADAMTSL4-AS1Q5T5F5 129 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 SPANXN1Q5VSR9 72 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 NAV2Q8IVL1 2488 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 DCANP1Q8TF63 244 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 TOMM6Q96B49 74 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 MOB4Q9Y3A3 225 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 U3KQA8 63 aa2.7□□□□□ -1.98
COL8A1-205ENST00000463753 POLEQ07864 2286 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 MGPP08493 103 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 CCL11P51671 97 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 PLGLAQ15195 96 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 MRPL55Q7Z7F7 128 aaKnown RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 FAM216BQ8N7L0 139 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 RPL39LQ96EH5 51 aaKnown RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 BPESC1Q9GZL8 116 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF580Q9UK33 172 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 RIF1Q5UIP0 2472 aaKnown RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 MED13Q9UHV7 2174 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 MED13LQ71F56 2210 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 IGLV4-69A0A075B6H9 119 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 BAALC-AS2P0C853 105 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 PRB3Q04118 309 aaPredicted RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 CD164Q04900 197 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 KPRPQ5T749 579 aaPredicted RBP2.69□□□□□ -1.98
COL8A1-205ENST00000463753 DAND5Q8N907 189 aa2.69□□□□□ -1.98
COL8A1-205ENST00000463753 CACNA1EQ15878 2313 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV1OR21-1A0A087WYE8 117 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 MRPL33O75394 65 aaKnown RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 SAA4P35542 130 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 LYPD5Q6UWN5 251 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 LINC01600Q96MT4 127 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 Q9HAA7 133 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 C14orf132Q9NPU4 83 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 F8WEM9 126 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 SPRY3O43610 288 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 HOXD3P31249 432 aaPredicted RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 SUMO2P61956 95 aaKnown RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 THAP8Q8NA92 274 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 ZNRF1Q8ND25 227 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 C11orf45Q8TAV5 145 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 RMI2Q96E14 147 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF625Q96I27 306 aaPredicted RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 AMELXQ99217 191 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 NDUFA4L2Q9NRX3 87 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 SLC25A15Q9Y619 301 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 S4R3C0 116 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 ABCA1O95477 2261 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 NAV3Q8IVL0 2385 aa2.68□□□□□ -1.98
COL8A1-205ENST00000463753 RAI1Q7Z5J4 1906 aaPredicted RBP2.68□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV3OR16-10A0A075B7F0 116 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 A0A087WZ39 114 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 A0A0J9YXY3 114 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 H7BZZ5 65 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 M0R381 172 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 CCKP06307 115 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms