RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 RHODO00212 210 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 TRBV12-3P01733 135 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 CD7P09564 240 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 MALP21145 153 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 NSUN5P1Q3KNT7 163 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 PRR31Q5SQ13 230 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 PRR9Q5T870 116 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 Q6YL49 198 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 GTSCR1Q86UQ5 136 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 C9orf85Q96MD7 179 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 HIST1H4GQ99525 98 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 LINC00467Q9BRT7 94 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 MCRIP2Q9BUT9 160 aaKnown RBP3.52□□□□□ -1.85
VPS72-203ENST00000463470 KLK15Q9H2R5 256 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 LINC00527Q9UJ94 153 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 ZNF256Q9Y2P7 627 aaPredicted RBP3.52□□□□□ -1.85
VPS72-203ENST00000463470 SPCS1Q9Y6A9 102 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 TRAV26-2A0A0B4J265 109 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 IGHV3-16A0A0C4DH30 117 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 A0A1B0GWB2 263 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 PRSS29PA6NIE9 313 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 A8MTW9 85 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 A8MWV9 139 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 I3L3M4 83 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 GNRH2O43555 120 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 TGFAP01135 160 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 FSHBP01225 129 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 GATA1P15976 413 aaPredicted RBP3.51□□□□□ -1.85
VPS72-203ENST00000463470 FXYD7P58549 80 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 DEFB112Q30KQ8 113 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 SCGB1D4Q6XE38 83 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 Q8N2B8 174 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 BAALCQ8WXS3 180 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 DNAJC30Q96LL9 226 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 SPXQ9BT56 116 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 VCX2Q9H322 139 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
VPS72-203ENST00000463470 TP73-AS1Q9UF72 201 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 PYGO1Q9Y3Y4 419 aa3.51□□□□□ -1.85
VPS72-203ENST00000463470 ANK3Q12955 4377 aaKnown RBP3.51□□□□□ -1.85
VPS72-203ENST00000463470 VWFP04275 2813 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 TRBV20-1A0A075B6N2 111 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 TRAV12-3A0A0B4J271 114 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 M0QY20 66 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 HOXA3O43365 443 aaPredicted RBP3.5□□□□□ -1.85
VPS72-203ENST00000463470 CIDEAO60543 219 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 IGHV4-59P01825 116 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 LINC00315P59091 139 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 RBX1P62877 108 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 ZNF415Q09FC8 603 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 SRSF9Q13242 221 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS72-203ENST00000463470 C12orf74Q32Q52 190 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 SUMO4Q6EEV6 95 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 Q6ZVH6 145 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 NFE4Q86UQ8 179 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 WFDC3Q8IUB2 231 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 PLEKHB2Q96CS7 222 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 ZNF479Q96JC4 524 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
VPS72-203ENST00000463470 C1orf43Q9BWL3 253 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 MDFICQ9P1T7 246 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 TP53TG1Q9Y2A0 90 aa3.5□□□□□ -1.85
VPS72-203ENST00000463470 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 ZNF815PA8K554 130 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 IGLL5B9A064 214 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 F6UB75 175 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 M0R2P5 195 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 ZNF688P0C7X2 276 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 LGALS3P17931 250 aaKnown RBP3.49□□□□□ -1.85
VPS72-203ENST00000463470 HOXD3P31249 432 aaPredicted RBP3.49□□□□□ -1.85
VPS72-203ENST00000463470 PCP4P48539 62 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 FXYD2P54710 66 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 ZNF56Q15929 161 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 RRN3P1Q2M238 152 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 ZNF876PQ49A33 203 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 TCTEX1D4Q5JR98 221 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 NEGR1Q7Z3B1 354 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
VPS72-203ENST00000463470 C4orf3Q8WVX3 66 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 RPL39LQ96EH5 51 aaKnown RBP3.49□□□□□ -1.85
VPS72-203ENST00000463470 DUX5Q96PT3 197 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 PRADC1Q9BSG0 188 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 NHP2Q9NX24 153 aaKnown RBP3.49□□□□□ -1.85
VPS72-203ENST00000463470 TGP01266 2768 aa3.49□□□□□ -1.85
VPS72-203ENST00000463470 IGKV3-7A0A075B6H7 116 aa3.48□□□□□ -1.85
VPS72-203ENST00000463470 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
VPS72-203ENST00000463470 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.48□□□□□ -1.85
VPS72-203ENST00000463470 TMEM238C9JI98 176 aa3.48□□□□□ -1.85
VPS72-203ENST00000463470 G3V4G9 280 aa3.48□□□□□ -1.85
VPS72-203ENST00000463470 LEPROTO15243 131 aa3.48□□□□□ -1.85
VPS72-203ENST00000463470 INSP01308 110 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms