RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TMEM250H0YL14 139 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 MGPP08493 103 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 GZMBP10144 247 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 GCSHP23434 173 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 Q0VG73 95 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 NEXN-AS1Q8NBZ9 246 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 DNAJC30Q96LL9 226 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 WDR73Q6P4I2 378 aa8.76□□□□□ -1.01
HDAC1-203ENST00000463172 Q8N814 137 aa8.76□□□□□ -1.01
HDAC1-203ENST00000463172 RPP21Q9H633 154 aaKnown RBP8.76□□□□□ -1.01
HDAC1-203ENST00000463172 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 LRCOL1A6NCL2 159 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 CRPP02741 224 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 LYZL1Q6UWQ5 148 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 NUDT10Q8NFP7 164 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 NUDT11Q96G61 164 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 CHCHD5Q9BSY4 110 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
HDAC1-203ENST00000463172 DPH3P1Q9H4G8 78 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 KLK12Q9UKR0 248 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 ABCA13Q86UQ4 5058 aa8.75□□□□□ -1.01
HDAC1-203ENST00000463172 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
HDAC1-203ENST00000463172 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
HDAC1-203ENST00000463172 Q8N1X5 172 aa8.74□□□□□ -1.01
HDAC1-203ENST00000463172 UBE2WQ96B02 151 aa8.74□□□□□ -1.01
HDAC1-203ENST00000463172 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
HDAC1-203ENST00000463172 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
HDAC1-203ENST00000463172 NTF3P20783 257 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 CEBPGP53567 150 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 TWIST1Q15672 202 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 Q8N3U1 123 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 LYPD6BQ8NI32 183 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 OCC1Q8TAD7 63 aa8.73□□□□□ -1.01
HDAC1-203ENST00000463172 APOBP04114 4563 aaKnown RBP8.72□□□□□ -1.01
HDAC1-203ENST00000463172 IGHV1-24A0A0C4DH33 117 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
HDAC1-203ENST00000463172 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
HDAC1-203ENST00000463172 CTRLP40313 264 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 SUMO4Q6EEV6 95 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 RNASE7Q9H1E1 156 aaKnown RBP8.72□□□□□ -1.01
HDAC1-203ENST00000463172 HSPG2P98160 4391 aa8.72□□□□□ -1.01
HDAC1-203ENST00000463172 A8MWL6 223 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 M0QY20 66 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 ANGP03950 147 aaKnown RBP8.71□□□□□ -1.02
HDAC1-203ENST00000463172 C14orf177Q52M58 125 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 C15orf54Q8N8G6 183 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 Q8N976 141 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 FRZBQ92765 325 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
HDAC1-203ENST00000463172 K7EN84 100 aa8.7□□□□□ -1.02
HDAC1-203ENST00000463172 NKX2-5P52952 324 aaPredicted RBP8.7□□□□□ -1.02
HDAC1-203ENST00000463172 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
HDAC1-203ENST00000463172 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
HDAC1-203ENST00000463172 TEX261Q6UWH6 196 aa8.7□□□□□ -1.02
HDAC1-203ENST00000463172 SMIM7Q9BQ49 75 aa8.7□□□□□ -1.02
HDAC1-203ENST00000463172 NIT2Q9NQR4 276 aa8.7□□□□□ -1.02
HDAC1-203ENST00000463172 MIAQ16674 131 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 IQCJQ1A5X6 159 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 CT83Q5H943 113 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 ATRAIDQ6UW56 229 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 FAM210AQ96ND0 272 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
HDAC1-203ENST00000463172 ZNF727A8MUV8 499 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 EPM2AB3EWF7 344 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 UBE2L6O14933 153 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 LECT2O14960 151 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 COTL1Q14019 142 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
HDAC1-203ENST00000463172 GAGE6Q13070 117 aa8.67□□□□□ -1.02
HDAC1-203ENST00000463172 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
HDAC1-203ENST00000463172 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
HDAC1-203ENST00000463172 XGP55808 180 aa8.66□□□□□ -1.02
HDAC1-203ENST00000463172 RBX1P62877 108 aa8.66□□□□□ -1.02
HDAC1-203ENST00000463172 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
HDAC1-203ENST00000463172 GFRA4Q9GZZ7 299 aa8.66□□□□□ -1.02
HDAC1-203ENST00000463172 A0A1B0GVG6 124 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 FAM231BA6NCW3 169 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 AMTP48728 403 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 WFDC2Q14508 124 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 LINC01551Q86U37 167 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
HDAC1-203ENST00000463172 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
HDAC1-203ENST00000463172 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
HDAC1-203ENST00000463172 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
HDAC1-203ENST00000463172 PEA15Q15121 130 aa8.64□□□□□ -1.03
HDAC1-203ENST00000463172 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
HDAC1-203ENST00000463172 TSKUQ8WUA8 353 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms