RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 NDUFA12Q9UI09 145 aa2.6□□□□□ -1.99
COL8A1-204ENST00000462604 ICOSQ9Y6W8 199 aa2.6□□□□□ -1.99
COL8A1-204ENST00000462604 TNRC18O15417 2968 aaPredicted RBP2.6□□□□□ -1.99
COL8A1-204ENST00000462604 INTS1Q8N201 2190 aaKnown RBP2.6□□□□□ -1.99
COL8A1-204ENST00000462604 CADP27708 2225 aa2.6□□□□□ -1.99
COL8A1-204ENST00000462604 KNTC1P50748 2209 aa2.6□□□□□ -1.99
COL8A1-204ENST00000462604 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DSCAML1Q8TD84 2053 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DIDO1Q9BTC0 2240 aaKnown RBP2.59□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV4-30-2A0A087WSY4 118 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 B4DSR2 109 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 PRSS2P07478 247 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 EDN2P20800 178 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 ATP5J2P56134 94 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 SYNJ2BPP57105 145 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DSCR9P59020 149 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 MRPS36P82909 103 aaKnown RBP2.59□□□□□ -1.99
COL8A1-204ENST00000462604 GAGE5Q13069 117 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 GAGE6Q13070 117 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 Q6Q795 121 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 TMEM61Q8N0U2 210 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 RNF183Q96D59 192 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 VSIG2Q96IQ7 327 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DNAJC30Q96LL9 226 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DUX5Q96PT3 197 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 DUX3Q96PT4 197 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 ZFHX4Q86UP3 3567 aa2.59□□□□□ -1.99
COL8A1-204ENST00000462604 MALRD1Q5VYJ5 2156 aa2.59□□□□□ -2
COL8A1-204ENST00000462604 OTOGLQ3ZCN5 2332 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 FAM240AA0A1B0GVK7 77 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 KNCNA6PVL3 124 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 C19orf84I3L1E1 186 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 J3QLI3 93 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 LST1O00453 97 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 NDUFA1O15239 70 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 INSP01308 110 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 IGHV4-59P01825 116 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 ELANEP08246 267 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 GNLYP22749 145 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 HOXD3P31249 432 aaPredicted RBP2.58□□□□□ -2
COL8A1-204ENST00000462604 NDUFV3P56181 108 aaKnown RBP2.58□□□□□ -2
COL8A1-204ENST00000462604 CIRBPQ14011 172 aaKnown RBP2.58□□□□□ -2
COL8A1-204ENST00000462604 DEFB112Q30KQ8 113 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 TTC32Q5I0X7 151 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 C15orf53Q8NAA6 179 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 LITAFQ99732 161 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 LINC00467Q9BRT7 94 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 BDP1A6H8Y1 2624 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 CELSR3Q9NYQ7 3312 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 NBEAQ8NFP9 2946 aa2.58□□□□□ -2
COL8A1-204ENST00000462604 URB1O60287 2271 aaKnown RBP2.57□□□□□ -2
COL8A1-204ENST00000462604 PLCE1Q9P212 2302 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.57□□□□□ -2
COL8A1-204ENST00000462604 TRAV8-3A0A0A6YYJ7 113 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 TEX49A0A1B0GTD5 131 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE12JA6NER3 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 A8MTW9 85 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 RS1O15537 224 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE7O76087 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE12FP0CL80 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE12GP0CL81 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE12IP0CL82 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 HTN1P15515 57 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 DEFB131AP59861 70 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 HERVK_113P63121 156 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 GAGE4Q13068 117 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 LY6DQ14210 128 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 RNASE13Q5GAN3 156 aaKnown RBP2.57□□□□□ -2
COL8A1-204ENST00000462604 ADAMTSL4-AS1Q5T5F5 129 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 CEMP1Q6PRD7 247 aaPredicted RBP2.57□□□□□ -2
COL8A1-204ENST00000462604 LINC01356Q8N9X3 169 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 DYNLRB2Q8TF09 96 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 UBE2E2Q96LR5 201 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 PEMTQ9UBM1 199 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 UBE2D4Q9Y2X8 147 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 BSNQ9UPA5 3926 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 FRYQ5TBA9 3013 aa2.57□□□□□ -2
COL8A1-204ENST00000462604 SMG1Q96Q15 3661 aaKnown RBP2.56□□□□□ -2
COL8A1-204ENST00000462604 IGLV5-45A0A087WSX0 123 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 H7C423 109 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 IGHV3-53P01767 116 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 ACYP1P07311 99 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 RBMY1A1P0DJD3 496 aaKnown RBP2.56□□□□□ -2
COL8A1-204ENST00000462604 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 NPC2P61916 151 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 HERV-K104P63124 156 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 RBMY1FQ15415 496 aaKnown RBP2.56□□□□□ -2
COL8A1-204ENST00000462604 DEFB121Q5J5C9 76 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 MEIG1Q5JSS6 88 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 C10orf99Q6UWK7 81 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 CLEC2BQ92478 149 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 TMEM101Q96IK0 257 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 LINC01587Q99440 93 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 OVOL2Q9BRP0 275 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 PRORYQ9H606 182 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 ZNF702PQ9H963 129 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms