RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 PEMTQ9UBM1 199 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 A0A0J9YY99 117 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 TRIAP1O43715 76 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 SYNJ2BPP57105 145 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 C6orf226Q5I0X4 101 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 C14orf178Q8N769 122 aaPredicted RBP4.43□□□□□ -1.7
CLK1-207ENST00000461981 CLEC2BQ92478 149 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 DNHD1Q96M86 4753 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 SPINT2O43291 252 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 UBE2E1P51965 193 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 ERCC8Q13216 396 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 C2orf83Q53S99 150 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 SDIM1Q6ZPB5 146 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 FAM223AQ8IWN6 122 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 ZNF714Q96N38 554 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 PROP1O75360 226 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 ZFP36P26651 326 aaKnown RBP4.42□□□□□ -1.7
CLK1-207ENST00000461981 CRIP1P50238 77 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 FHL2Q14192 279 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 S1PR3Q99500 378 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 A0A087WVE0 104 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 TRBV7-1A0A0A6YYK4 115 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 C3orf84H3BNL1 204 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 PSPNO60542 156 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 LY6HO94772 140 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 P0DMU3 169 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 FAM19A1Q7Z5A9 133 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 C8orf49Q96NF6 230 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 DCTN5Q9BTE1 182 aa4.42□□□□□ -1.7
CLK1-207ENST00000461981 SH2D1AO60880 128 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 PRSS2P07478 247 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
CLK1-207ENST00000461981 EGFEM1PQ0D2K5 195 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 SS18Q15532 418 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 VMA21Q3ZAQ7 101 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 MINOS1Q5TGZ0 78 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 NRACQ8N912 160 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 MINOS1-NBL1R4GNA1 71 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 ABCA1O95477 2261 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TRAV26-2A0A0B4J265 109 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TRAV12-3A0A0B4J271 114 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 CCL8P80075 99 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 CD69Q07108 199 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 LINC01006Q8NI28 216 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
CLK1-207ENST00000461981 C20orf173Q96LM9 149 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 OTORQ9NRC9 128 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 GNG12Q9UBI6 72 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TP53TG1Q9Y2A0 90 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TMEM30CPA0ZSE6 113 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 H3BT86 120 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 M0R3E3 92 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 LAGE3Q14657 143 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 LINC01559Q495D7 138 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 C5orf38Q86SI9 138 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 PRR25Q96S07 402 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 TMEM243Q9BU79 118 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 SPANXDQ9BXN6 97 aa4.41□□□□□ -1.7
CLK1-207ENST00000461981 MALRD1Q5VYJ5 2156 aa4.4□□□□□ -1.7
CLK1-207ENST00000461981 POLQO75417 2590 aa4.4□□□□□ -1.7
CLK1-207ENST00000461981 CSPG4Q6UVK1 2322 aa4.4□□□□□ -1.7
CLK1-207ENST00000461981 RNF185Q96GF1 192 aa4.4□□□□□ -1.7
CLK1-207ENST00000461981 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.7
CLK1-207ENST00000461981 IGKV3D-7A0A0C4DH55 119 aa4.4□□□□□ -1.71
CLK1-207ENST00000461981 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
CLK1-207ENST00000461981 LEAP2Q969E1 77 aa4.4□□□□□ -1.71
CLK1-207ENST00000461981 TMEM14BQ9NUH8 114 aa4.4□□□□□ -1.71
CLK1-207ENST00000461981 NACAE9PAV3 2078 aa4.4□□□□□ -1.71
CLK1-207ENST00000461981 AKAP6Q13023 2319 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 ZNF561-AS1K7EIQ3 104 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 SPRY3O43610 288 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 ACYP1P07311 99 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 RNASE2P10153 161 aaKnown RBP4.39□□□□□ -1.71
CLK1-207ENST00000461981 CXCL5P42830 114 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 Q6ZSV7 163 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 FP248Q71RG6 208 aaPredicted RBP4.39□□□□□ -1.71
CLK1-207ENST00000461981 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
CLK1-207ENST00000461981 TRAV12-2A0A075B6T6 113 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 IGHV3-21A0A0B4J1V1 117 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 LYNX1G3V0Z9 82 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 LYNX1P0DP58 116 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 GP9P14770 177 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
CLK1-207ENST00000461981 TMEM30BQ3MIR4 351 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 DAZ4Q86SG3 579 aaKnown RBP4.39□□□□□ -1.71
CLK1-207ENST00000461981 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 SLC25A29Q8N8R3 303 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 TMEM75Q8N9X5 138 aa4.39□□□□□ -1.71
CLK1-207ENST00000461981 CCL17Q92583 94 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms