RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 OTORQ9NRC9 128 aa3.19□□□□□ -1.9
BRCA1-206ENST00000461574 KIF25-AS1Q9Y6Z4 181 aa3.19□□□□□ -1.9
BRCA1-206ENST00000461574 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 PKIAP61925 76 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 GNG5P63218 68 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 MPV17L2Q567V2 206 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 ENHOQ6UWT2 76 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 SDIM1Q6ZPB5 146 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 OR5C1Q8NGR4 320 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 PTH2Q96A98 100 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 LINC00479Q96M42 142 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 OR5AC2Q9NZP5 309 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 MBD2Q9UBB5 411 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 Q9UF83 564 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 V9GYH0 126 aa3.18□□□□□ -1.9
BRCA1-206ENST00000461574 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 PTTG1O95997 202 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 RNASE3P12724 160 aaKnown RBP3.17□□□□□ -1.9
BRCA1-206ENST00000461574 ZNF80P51504 273 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-206ENST00000461574 TMBIM6P55061 237 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
BRCA1-206ENST00000461574 SMUG1Q53HV7 270 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 PRNTQ86SH4 94 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 OR11H4Q8NGC9 324 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 WDR61Q9GZS3 305 aaKnown RBP3.17□□□□□ -1.9
BRCA1-206ENST00000461574 JPT2Q9H910 190 aa3.17□□□□□ -1.9
BRCA1-206ENST00000461574 IGLV10-54A0A075B6I4 117 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 TRBV6-8A0A0A6YYG3 113 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 IGKV2-24A0A0C4DH68 120 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 A0A1W2PPV4 95 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 H3BMQ9 156 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 H3BVH4 76 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 M0R381 172 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
BRCA1-206ENST00000461574 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
BRCA1-206ENST00000461574 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-206ENST00000461574 CIRBPQ14011 172 aaKnown RBP3.16□□□□□ -1.9
BRCA1-206ENST00000461574 ZNF56Q15929 161 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 CNPY1Q3B7I2 92 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 PIK3CD-AS1Q5SR53 167 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 LINC00269Q8N2A0 174 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 LYPD6BQ8NI32 183 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 C11orf1Q9H5F2 150 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 PSG8Q9UQ74 426 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 PHLDA3Q9Y5J5 127 aa3.16□□□□□ -1.9
BRCA1-206ENST00000461574 LPAP08519 4548 aa3.15□□□□□ -1.9
BRCA1-206ENST00000461574 FAM231BA6NCW3 169 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 CCDC160A6NGH7 325 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 B4DEV8 164 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 M0R036 132 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 HMGB3O15347 200 aaKnown RBP3.15□□□□□ -1.91
BRCA1-206ENST00000461574 TCRBP04435 133 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 TCRAP04437 139 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 TPT1P13693 172 aaKnown RBP3.15□□□□□ -1.91
BRCA1-206ENST00000461574 UBE2D3P61077 147 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 UBE2D2P62837 147 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 LRRC37A5PQ49AS3 106 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 SAPCD1Q5SSQ6 148 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 SPINK6Q6UWN8 80 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 PQLC2Q6ZP29 291 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 C5orf17Q8NAS9 161 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 SEC22CQ9BRL7 303 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 PLAC8Q9NZF1 115 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 IL36BQ9NZH7 164 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.91
BRCA1-206ENST00000461574 TRBV25-1A0A075B6N4 114 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 IGKV3D-20A0A0C4DH25 116 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 FABP5P3A8MUU1 101 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 H7C1H1 209 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 IFNA7P01567 189 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 ARMS2P0C7Q2 107 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 ARL14EPLP0DKL9 152 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 VPREB1P12018 145 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 BTCP35070 178 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 RAB5CP51148 216 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 RBX1P62877 108 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 COX6A2Q02221 97 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 REG3AQ06141 175 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 GAGE6Q13070 117 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 TMEM97Q5BJF2 176 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 ZFP82Q8N141 532 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 STPG4Q8N801 248 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 SFRP2Q96HF1 295 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 CBY1Q9Y3M2 126 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 MUC2Q02817 5179 aa3.14□□□□□ -1.91
BRCA1-206ENST00000461574 TMSB15BA0A087X1C1 80 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 GRIFINA4D1Z8 144 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 NDUFS6O75380 124 aaKnown RBP3.13□□□□□ -1.91
BRCA1-206ENST00000461574 P01737 135 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms