RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 SLC25A16P16260 332 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 LEPP41159 167 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 UBE2E1P51965 193 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 FAM104BQ5XKR9 115 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 Q71RC1 249 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-219ENST00000461159 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 FN1P02751 2386 aaKnown RBP6.49□□□□□ -1.37
HDAC9-219ENST00000461159 TRBV25-1A0A075B6N4 114 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 EPM2AB3EWF7 344 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 LINC01559Q495D7 138 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 MYMXA0A1B0GTQ4 84 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 TEX22C9J3V5 150 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 HOXA3O43365 443 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-219ENST00000461159 DSCR9P59020 149 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 LY6EQ16553 131 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 DGAT2L7PQ6IED9 249 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 DSCR8Q96T75 97 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-219ENST00000461159 F8P00451 2351 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 LINC01548A6NM66 108 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 H3BRN7 92 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 NPYP01303 97 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 LOXL1Q08397 574 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-219ENST00000461159 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 LINC01356Q8N9X3 169 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
HDAC9-219ENST00000461159 IGHV4-31P0DP07 118 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 I3L2K1 104 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 CKS2P33552 79 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 CRIP1P50238 77 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 Q8N1Y9 231 aa6.47□□□□□ -1.37
HDAC9-219ENST00000461159 hADV29S1A0JD25 119 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 TCL1BO95988 128 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 P0DMU3 169 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 FAM231AP0DMU4 169 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 FAM231CP0DMU5 169 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 PDE6HQ13956 83 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
HDAC9-219ENST00000461159 MINOS1Q5TGZ0 78 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 SMR3AQ99954 134 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 LINC00527Q9UJ94 153 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 MINOS1-NBL1R4GNA1 71 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-219ENST00000461159 MAST4O15021 2626 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 TMSB15BA0A087X1C1 80 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 IGKV1-17P01599 117 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 LINC01561Q8N1V8 128 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
HDAC9-219ENST00000461159 TRAV12-2A0A075B6T6 113 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 LGALS9O00182 355 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 ATOX1O00244 68 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 SLC25A20O43772 301 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 SH2D1AO60880 128 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 NDPQ00604 133 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 S4R3C0 116 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 TWIST1Q15672 202 aa6.45□□□□□ -1.38
HDAC9-219ENST00000461159 H3BUX3 64 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 H3BVH4 76 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 M0R3E3 92 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 FXYD7P58549 80 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 LINC00482Q8N8I6 264 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 ZNF491Q8N8L2 437 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 DPH3P1Q9H4G8 78 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 LOC107984156A0A0G2JMH3 177 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 MRPS12O15235 138 aaKnown RBP6.44□□□□□ -1.38
HDAC9-219ENST00000461159 NDUFA3O95167 84 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 ELANEP08246 267 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 CXCL5P42830 114 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 ZNF56Q15929 161 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 ARL17AQ8IVW1 177 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 NPBQ8NG41 125 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
HDAC9-219ENST00000461159 K7EIM0 57 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 SRSF9Q13242 221 aaKnown RBP eCLIP6.43□□□□□ -1.38
HDAC9-219ENST00000461159 DEFB112Q30KQ8 113 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 CEMP1Q6PRD7 247 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-219ENST00000461159 Q6ZS46 218 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
HDAC9-219ENST00000461159 WI2-2373I1.2A0A1W2PRP0 233 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 SMKR1H3BMG3 65 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 IGHV4-59P01825 116 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 PRSS1P07477 247 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 FCER1GP30273 86 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 Q8N6K4 173 aa6.43□□□□□ -1.38
HDAC9-219ENST00000461159 Q8N9W7 124 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms