RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 TRAV8-6A0A0B4J262 113 aa13.98□□□□□ -0.17
RPUSD3-210ENST00000460909 IGHV3-38A0A0C4DH36 116 aa13.98□□□□□ -0.17
RPUSD3-210ENST00000460909 A0A087WWC5 75 aa13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 A0A1B0GUT8 65 aa13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 K7EP13 123 aa13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 BTF3P20290 206 aaKnown RBP13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 LINC01556Q5JQF7 62 aa13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 NUP35Q8NFH5 326 aa13.97□□□□□ -0.17
RPUSD3-210ENST00000460909 PRSS29PA6NIE9 313 aa13.96□□□□□ -0.17
RPUSD3-210ENST00000460909 TRAV9-2A0A087WT02 112 aa13.95□□□□□ -0.18
RPUSD3-210ENST00000460909 SMIM27A0A1W2PRY6 76 aa13.95□□□□□ -0.18
RPUSD3-210ENST00000460909 H7C1H1 209 aa13.95□□□□□ -0.18
RPUSD3-210ENST00000460909 A0A1B0GVY2 172 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 RASL11AQ6T310 242 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 BORCS7Q96B45 105 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 DNAJC30Q96LL9 226 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 NAT8BQ9UHF3 227 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 TNFRSF18Q9Y5U5 241 aa13.94□□□□□ -0.18
RPUSD3-210ENST00000460909 SMIM15Q7Z3B0 74 aa13.93□□□□□ -0.18
RPUSD3-210ENST00000460909 Q8N3U1 123 aa13.93□□□□□ -0.18
RPUSD3-210ENST00000460909 GATD1Q8NB37 220 aa13.93□□□□□ -0.18
RPUSD3-210ENST00000460909 DNAH11Q96DT5 4516 aa13.93□□□□□ -0.18
RPUSD3-210ENST00000460909 PNRC1Q12796 327 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 Q6ZRN7 208 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 TMEM191AQ9H0A3 160 aa13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-210ENST00000460909 TRBV6-8A0A0A6YYG3 113 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 TRAV26-2A0A0B4J265 109 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 ADCYAP1P18509 176 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 TNP2Q05952 138 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 C10orf126Q8N4M7 172 aa13.91□□□□□ -0.18
RPUSD3-210ENST00000460909 TMEM218A2RU14 115 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 IGHV3-30P01768 117 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 IGHV3-33P01772 117 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 IGHV3-30-3P0DP02 117 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 IGHV3-30-5P0DP03 117 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 NIT1Q86X76 327 aa13.9□□□□□ -0.18
RPUSD3-210ENST00000460909 PKHD1P08F94 4074 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 IBA57-AS1B1ANH7 110 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 RIGQ13278 110 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 FRZBQ92765 325 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 RNF185Q96GF1 192 aa13.89□□□□□ -0.19
RPUSD3-210ENST00000460909 COMMD7Q86VX2 200 aa13.88□□□□□ -0.19
RPUSD3-210ENST00000460909 PPP1R2P9O14990 202 aa13.87□□□□□ -0.19
RPUSD3-210ENST00000460909 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.87□□□□□ -0.19
RPUSD3-210ENST00000460909 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
RPUSD3-210ENST00000460909 GAS8-AS1O95177 125 aa13.86□□□□□ -0.19
RPUSD3-210ENST00000460909 RAB4AP20338 218 aa13.86□□□□□ -0.19
RPUSD3-210ENST00000460909 TMEM97Q5BJF2 176 aa13.86□□□□□ -0.19
RPUSD3-210ENST00000460909 NFE4Q86UQ8 179 aa13.86□□□□□ -0.19
RPUSD3-210ENST00000460909 AMN1Q8IY45 258 aa13.85□□□□□ -0.19
RPUSD3-210ENST00000460909 ANAPC16Q96DE5 110 aa13.85□□□□□ -0.19
RPUSD3-210ENST00000460909 F8W036 122 aa13.84□□□□□ -0.19
RPUSD3-210ENST00000460909 MT-ND4LP03901 98 aa13.84□□□□□ -0.19
RPUSD3-210ENST00000460909 CHCHD7Q9BUK0 85 aa13.84□□□□□ -0.19
RPUSD3-210ENST00000460909 SEC11CQ9BY50 192 aa13.84□□□□□ -0.19
RPUSD3-210ENST00000460909 BIRC6Q9NR09 4857 aa13.84□□□□□ -0.19
RPUSD3-210ENST00000460909 TRBV6-5A0A0K0K1A5 114 aa13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 A0A1B0GW15 77 aa13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 A0A1B0GXF2 115 aa13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 LAGE3Q14657 143 aa13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 IQCJQ1A5X6 159 aa13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 DYNC1H1Q14204 4646 aaKnown RBP13.83□□□□□ -0.2
RPUSD3-210ENST00000460909 CAMPP49913 170 aa13.82□□□□□ -0.2
RPUSD3-210ENST00000460909 MRAP2Q96G30 205 aa13.82□□□□□ -0.2
RPUSD3-210ENST00000460909 URGCP-MRPS24S4R325 110 aa13.82□□□□□ -0.2
RPUSD3-210ENST00000460909 TRBV25-1A0A075B6N4 114 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 A0A087WX48 190 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 RPS10P46783 165 aaKnown RBP13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 C10orf91Q5T1B1 145 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 FAM104BQ5XKR9 115 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 MRPL54Q6P161 138 aaKnown RBP13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 DEFB104AQ8WTQ1 72 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 CHCHD5Q9BSY4 110 aa13.81□□□□□ -0.2
RPUSD3-210ENST00000460909 IGHV1-24A0A0C4DH33 117 aa13.8□□□□□ -0.2
RPUSD3-210ENST00000460909 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
RPUSD3-210ENST00000460909 MPV17L2Q567V2 206 aa13.8□□□□□ -0.2
RPUSD3-210ENST00000460909 KCNIP4Q6PIL6 250 aa13.8□□□□□ -0.2
RPUSD3-210ENST00000460909 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
RPUSD3-210ENST00000460909 HBBP68871 147 aa13.79□□□□□ -0.2
RPUSD3-210ENST00000460909 MRPL51Q4U2R6 128 aaKnown RBP13.79□□□□□ -0.2
RPUSD3-210ENST00000460909 Q9HAA7 133 aa13.79□□□□□ -0.2
RPUSD3-210ENST00000460909 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
RPUSD3-210ENST00000460909 COTL1Q14019 142 aa13.78□□□□□ -0.2
RPUSD3-210ENST00000460909 ATRAIDQ6UW56 229 aa13.78□□□□□ -0.2
RPUSD3-210ENST00000460909 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
RPUSD3-210ENST00000460909 KLK12Q9UKR0 248 aa13.78□□□□□ -0.2
RPUSD3-210ENST00000460909 NCR2O95944 276 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 S100A8P05109 93 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 POLR2KP53803 58 aaKnown RBP13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 PKIAP61925 76 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 GAGE6Q13070 117 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 NRACQ8N912 160 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 TMEM70Q9BUB7 260 aa13.77□□□□□ -0.21
RPUSD3-210ENST00000460909 TRAV8-3A0A0A6YYJ7 113 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms