RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 Q9H8V8 135 aa9.58□□□□□ -0.88
HDLBP-229ENST00000460826 CARHSP1Q9Y2V2 147 aaKnown RBP9.58□□□□□ -0.88
HDLBP-229ENST00000460826 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
HDLBP-229ENST00000460826 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
HDLBP-229ENST00000460826 Q6ZR54 194 aa9.57□□□□□ -0.88
HDLBP-229ENST00000460826 SMIM15Q7Z3B0 74 aa9.57□□□□□ -0.88
HDLBP-229ENST00000460826 GATD1Q8NB37 220 aa9.57□□□□□ -0.88
HDLBP-229ENST00000460826 TMEM191AQ9H0A3 160 aa9.57□□□□□ -0.88
HDLBP-229ENST00000460826 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
HDLBP-229ENST00000460826 RNF185Q96GF1 192 aa9.56□□□□□ -0.88
HDLBP-229ENST00000460826 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
HDLBP-229ENST00000460826 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 H7C1H1 209 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 SIVA1O15304 175 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 CAMPP49913 170 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 LELP1Q5T871 98 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
HDLBP-229ENST00000460826 RAB4AP20338 218 aa9.54□□□□□ -0.88
HDLBP-229ENST00000460826 OR10J3Q5JRS4 329 aa9.54□□□□□ -0.88
HDLBP-229ENST00000460826 CLRN3Q8NCR9 226 aa9.54□□□□□ -0.88
HDLBP-229ENST00000460826 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
HDLBP-229ENST00000460826 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
HDLBP-229ENST00000460826 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
HDLBP-229ENST00000460826 FAT2Q9NYQ8 4349 aa9.53□□□□□ -0.88
HDLBP-229ENST00000460826 C7orf77A4D0Y5 90 aa9.53□□□□□ -0.88
HDLBP-229ENST00000460826 HBBP68871 147 aa9.53□□□□□ -0.88
HDLBP-229ENST00000460826 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
HDLBP-229ENST00000460826 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
HDLBP-229ENST00000460826 A0A1B0GW15 77 aa9.52□□□□□ -0.89
HDLBP-229ENST00000460826 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
HDLBP-229ENST00000460826 APOC3P02656 99 aa9.52□□□□□ -0.89
HDLBP-229ENST00000460826 FAM104BQ5XKR9 115 aa9.52□□□□□ -0.89
HDLBP-229ENST00000460826 CTDSP1Q9GZU7 261 aa9.52□□□□□ -0.89
HDLBP-229ENST00000460826 TRAV8-6A0A0B4J262 113 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 NCR2O95944 276 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 Q8N3U1 123 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
HDLBP-229ENST00000460826 A0A087WWC5 75 aa9.5□□□□□ -0.89
HDLBP-229ENST00000460826 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
HDLBP-229ENST00000460826 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
HDLBP-229ENST00000460826 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
HDLBP-229ENST00000460826 IMMP2LQ96T52 175 aa9.5□□□□□ -0.89
HDLBP-229ENST00000460826 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
HDLBP-229ENST00000460826 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 S100A8P05109 93 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 RHEBQ15382 184 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 FRZBQ92765 325 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 BTF3L4Q96K17 158 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
HDLBP-229ENST00000460826 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
HDLBP-229ENST00000460826 RTL8CO15255 209 aa9.48□□□□□ -0.89
HDLBP-229ENST00000460826 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
HDLBP-229ENST00000460826 NRACQ8N912 160 aa9.48□□□□□ -0.89
HDLBP-229ENST00000460826 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 NDUFA5Q16718 116 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 NIT1Q86X76 327 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-229ENST00000460826 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
HDLBP-229ENST00000460826 EPPK1P58107 5090 aaKnown RBP9.47□□□□□ -0.89
HDLBP-229ENST00000460826 TMEM97Q5BJF2 176 aa9.46□□□□□ -0.9
HDLBP-229ENST00000460826 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
HDLBP-229ENST00000460826 SVBPQ8N300 66 aa9.46□□□□□ -0.9
HDLBP-229ENST00000460826 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
HDLBP-229ENST00000460826 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
HDLBP-229ENST00000460826 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 D6R8Y8 96 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 SNAPINO95295 136 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 CKS2P33552 79 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
HDLBP-229ENST00000460826 IQCJQ1A5X6 159 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-229ENST00000460826 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 PKD1P98161 4303 aa9.45□□□□□ -0.9
HDLBP-229ENST00000460826 TRBV25-1A0A075B6N4 114 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 S100PP25815 95 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 COTL1Q14019 142 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 TMEM136Q6ZRR5 245 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 HECTD4Q9Y4D8 3996 aa9.44□□□□□ -0.9
HDLBP-229ENST00000460826 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
HDLBP-229ENST00000460826 NPYP01303 97 aa9.43□□□□□ -0.9
HDLBP-229ENST00000460826 GAGE6Q13070 117 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms