RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LINC00694P0DN24 101 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 GAGE1Q13065 139 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 GAGE4Q13068 117 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 GAGE5Q13069 117 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 GAGE13Q4V321 117 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 ATP6V0E2Q8NHE4 81 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 TRBV7-3A0A075B6L6 115 aa15.48■□□□□ 0.07
C9orf3-209ENST00000460573 TMEM191AQ9H0A3 160 aa15.48■□□□□ 0.07
C9orf3-209ENST00000460573 CBLN2Q8IUK8 224 aa15.47■□□□□ 0.07
C9orf3-209ENST00000460573 ZNRF2Q8NHG8 242 aa15.47■□□□□ 0.07
C9orf3-209ENST00000460573 FRZBQ92765 325 aa15.47■□□□□ 0.07
C9orf3-209ENST00000460573 BTF3L4Q96K17 158 aa15.47■□□□□ 0.07
C9orf3-209ENST00000460573 GTSF1LQ9H1H1 148 aa15.47■□□□□ 0.07
C9orf3-209ENST00000460573 KMT2AQ03164 3969 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 M0QY20 66 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 S100PP25815 95 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 SUMO4Q6EEV6 95 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 NEXN-AS1Q8NBZ9 246 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 DNAJC30Q96LL9 226 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 Q9UF83 564 aa15.46■□□□□ 0.07
C9orf3-209ENST00000460573 S100A8P05109 93 aa15.45■□□□□ 0.06
C9orf3-209ENST00000460573 UBE2D3P61077 147 aa15.44■□□□□ 0.06
C9orf3-209ENST00000460573 UBE2D2P62837 147 aa15.44■□□□□ 0.06
C9orf3-209ENST00000460573 KCNIP4Q6PIL6 250 aa15.44■□□□□ 0.06
C9orf3-209ENST00000460573 RASL11AQ6T310 242 aa15.44■□□□□ 0.06
C9orf3-209ENST00000460573 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-209ENST00000460573 ATP5L2Q7Z4Y8 100 aa15.43■□□□□ 0.06
C9orf3-209ENST00000460573 Q9H8V8 135 aa15.43■□□□□ 0.06
C9orf3-209ENST00000460573 TNFRSF18Q9Y5U5 241 aa15.43■□□□□ 0.06
C9orf3-209ENST00000460573 TRAV9-1A0A075B6T8 112 aa15.42■□□□□ 0.06
C9orf3-209ENST00000460573 HBBP68871 147 aa15.42■□□□□ 0.06
C9orf3-209ENST00000460573 NIT2Q9NQR4 276 aa15.42■□□□□ 0.06
C9orf3-209ENST00000460573 COLCA2A8K830 154 aa15.41■□□□□ 0.06
C9orf3-209ENST00000460573 LELP1Q5T871 98 aa15.41■□□□□ 0.06
C9orf3-209ENST00000460573 YPEL4Q96NS1 127 aa15.41■□□□□ 0.06
C9orf3-209ENST00000460573 TRAV8-6A0A0B4J262 113 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 A0A1B0GXF2 115 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 SIVA1O15304 175 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 CAMPP49913 170 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 ELOBQ15370 118 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 MRPL54Q6P161 138 aaKnown RBP15.4■□□□□ 0.06
C9orf3-209ENST00000460573 DAZ4Q86SG3 579 aaKnown RBP15.4■□□□□ 0.06
C9orf3-209ENST00000460573 GATD1Q8NB37 220 aa15.4■□□□□ 0.06
C9orf3-209ENST00000460573 DAZ3Q9NR90 486 aaKnown RBP15.4■□□□□ 0.06
C9orf3-209ENST00000460573 TRBV24-1A0A075B6N3 115 aa15.39■□□□□ 0.05
C9orf3-209ENST00000460573 RAB4AP20338 218 aa15.39■□□□□ 0.05
C9orf3-209ENST00000460573 M0R2N4 97 aa15.38■□□□□ 0.05
C9orf3-209ENST00000460573 TMEM97Q5BJF2 176 aa15.38■□□□□ 0.05
C9orf3-209ENST00000460573 AMN1Q8IY45 258 aa15.38■□□□□ 0.05
C9orf3-209ENST00000460573 MRAP2Q96G30 205 aa15.38■□□□□ 0.05
C9orf3-209ENST00000460573 RNF185Q96GF1 192 aa15.38■□□□□ 0.05
C9orf3-209ENST00000460573 TRAV26-2A0A0B4J265 109 aa15.37■□□□□ 0.05
C9orf3-209ENST00000460573 OR10J3Q5JRS4 329 aa15.37■□□□□ 0.05
C9orf3-209ENST00000460573 FAM104BQ5XKR9 115 aa15.37■□□□□ 0.05
C9orf3-209ENST00000460573 IGLV2-18A0A075B6J9 118 aa15.36■□□□□ 0.05
C9orf3-209ENST00000460573 LINC00336Q6ZUF6 198 aa15.36■□□□□ 0.05
C9orf3-209ENST00000460573 URGCP-MRPS24S4R325 110 aa15.36■□□□□ 0.05
C9orf3-209ENST00000460573 NBDYA0A0U1RRE5 68 aa15.35■□□□□ 0.05
C9orf3-209ENST00000460573 K7EP13 123 aa15.35■□□□□ 0.05
C9orf3-209ENST00000460573 TTC32Q5I0X7 151 aa15.35■□□□□ 0.05
C9orf3-209ENST00000460573 VPS13DQ5THJ4 4388 aa15.35■□□□□ 0.05
C9orf3-209ENST00000460573 PPP1R17O96001 155 aa15.34■□□□□ 0.05
C9orf3-209ENST00000460573 Q6ZR54 194 aa15.34■□□□□ 0.05
C9orf3-209ENST00000460573 WFDC10BQ8IUB3 73 aa15.34■□□□□ 0.05
C9orf3-209ENST00000460573 RAB5AP20339 215 aa15.33■□□□□ 0.04
C9orf3-209ENST00000460573 FRAS1Q86XX4 4008 aa15.33■□□□□ 0.04
C9orf3-209ENST00000460573 TRAV9-2A0A087WT02 112 aa15.32■□□□□ 0.04
C9orf3-209ENST00000460573 IGHV3-38A0A0C4DH36 116 aa15.32■□□□□ 0.04
C9orf3-209ENST00000460573 TRBV6-5A0A0K0K1A5 114 aa15.32■□□□□ 0.04
C9orf3-209ENST00000460573 DNAH10OSP0CZ25 163 aa15.32■□□□□ 0.04
C9orf3-209ENST00000460573 MRPL51Q4U2R6 128 aaKnown RBP15.32■□□□□ 0.04
C9orf3-209ENST00000460573 RPL39LQ96EH5 51 aaKnown RBP15.32■□□□□ 0.04
C9orf3-209ENST00000460573 TRBV6-8A0A0A6YYG3 113 aa15.31■□□□□ 0.04
C9orf3-209ENST00000460573 COX19Q49B96 90 aa15.31■□□□□ 0.04
C9orf3-209ENST00000460573 TGIF2-C20orf24A0A0A6YYL0 155 aa15.3■□□□□ 0.04
C9orf3-209ENST00000460573 LINC01556Q5JQF7 62 aa15.3■□□□□ 0.04
C9orf3-209ENST00000460573 PPBPP02775 128 aa15.29■□□□□ 0.04
C9orf3-209ENST00000460573 BTF3P20290 206 aaKnown RBP15.29■□□□□ 0.04
C9orf3-209ENST00000460573 ST20Q9HBF5 79 aa15.29■□□□□ 0.04
C9orf3-209ENST00000460573 SDHAF1A6NFY7 115 aa15.28■□□□□ 0.04
C9orf3-209ENST00000460573 PRSS29PA6NIE9 313 aa15.28■□□□□ 0.04
C9orf3-209ENST00000460573 CKS2P33552 79 aa15.28■□□□□ 0.04
C9orf3-209ENST00000460573 C10orf126Q8N4M7 172 aa15.28■□□□□ 0.04
C9orf3-209ENST00000460573 TRBV25-1A0A075B6N4 114 aa15.27■□□□□ 0.04
C9orf3-209ENST00000460573 GAS8-AS1O95177 125 aa15.27■□□□□ 0.04
C9orf3-209ENST00000460573 PKIAP61925 76 aa15.27■□□□□ 0.04
C9orf3-209ENST00000460573 COTL1Q14019 142 aa15.27■□□□□ 0.04
C9orf3-209ENST00000460573 DNAH6Q9C0G6 4158 aa15.26■□□□□ 0.03
C9orf3-209ENST00000460573 SMKR1H3BMG3 65 aa15.26■□□□□ 0.03
C9orf3-209ENST00000460573 RPS10P46783 165 aaKnown RBP15.26■□□□□ 0.03
C9orf3-209ENST00000460573 IQCJQ1A5X6 159 aa15.26■□□□□ 0.03
C9orf3-209ENST00000460573 NTM-AS1Q6ZSK4 140 aa15.26■□□□□ 0.03
C9orf3-209ENST00000460573 CHCHD7Q9BUK0 85 aa15.26■□□□□ 0.03
C9orf3-209ENST00000460573 IGHV1-24A0A0C4DH33 117 aa15.25■□□□□ 0.03
C9orf3-209ENST00000460573 NCR2O95944 276 aa15.25■□□□□ 0.03
C9orf3-209ENST00000460573 NIT1Q86X76 327 aa15.25■□□□□ 0.03
C9orf3-209ENST00000460573 NRACQ8N912 160 aa15.25■□□□□ 0.03
C9orf3-209ENST00000460573 D6R8Y8 96 aa15.24■□□□□ 0.03
C9orf3-209ENST00000460573 I3L3M4 83 aa15.24■□□□□ 0.03
C9orf3-209ENST00000460573 PHOX2AO14813 284 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 352.7 ms